RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 EDNRBP24530 442 aa28.98■■■□□ 2.23
COL13A1-210ENST00000517713 RSRC2Q7L4I2 434 aaKnown RBP28.98■■■□□ 2.23
COL13A1-210ENST00000517713 ARMC9Q7Z3E5 817 aa28.98■■■□□ 2.23
COL13A1-210ENST00000517713 TMEM161BQ8NDZ6 487 aa28.98■■■□□ 2.23
COL13A1-210ENST00000517713 CBWD1Q9BRT8 395 aa28.98■■■□□ 2.23
COL13A1-210ENST00000517713 C17orf75Q9HAS0 396 aa28.98■■■□□ 2.23
COL13A1-210ENST00000517713 PDLIM7Q9NR12 457 aa28.98■■■□□ 2.23
COL13A1-210ENST00000517713 EXOC7Q9UPT5 735 aa28.98■■■□□ 2.23
COL13A1-210ENST00000517713 IGSF9BQ9UPX0 1349 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 PJA2O43164 708 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 ATG7O95352 703 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 SLC25A27O95847 323 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 IRF2BP2Q7Z5L9 587 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 MCPH1Q8NEM0 835 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 HVCN1Q96D96 273 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 KMT5AQ9NQR1 393 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 CYP26B1Q9NR63 512 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 TBX20Q9UMR3 447 aa28.97■■■□□ 2.23
COL13A1-210ENST00000517713 WHAMMP3Q1A5X7 153 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 CBWD6Q4V339 395 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 EAPPQ56P03 285 aaPredicted RBP28.96■■■□□ 2.23
COL13A1-210ENST00000517713 XKR3Q5GH77 459 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 CBWD3Q5JTY5 395 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 CBWD5Q5RIA9 395 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 INTS8Q75QN2 995 aaKnown RBP28.96■■■□□ 2.23
COL13A1-210ENST00000517713 XXYLT1Q8NBI6 393 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 SPIRE2Q8WWL2 714 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 NTPCRQ9BSD7 190 aaKnown RBP28.96■■■□□ 2.23
COL13A1-210ENST00000517713 HSPBP1Q9NZL4 362 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 BZW2Q9Y6E2 419 aaKnown RBP28.96■■■□□ 2.23
COL13A1-210ENST00000517713 GLTPD2A6NH11 291 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 ENC1O14682 589 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 MOGSQ13724 837 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 ENOX2Q16206 610 aaKnown RBP28.96■■■□□ 2.23
COL13A1-210ENST00000517713 SLC18A3Q16572 532 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 FASTKD5Q7L8L6 764 aaKnown RBP28.96■■■□□ 2.23
COL13A1-210ENST00000517713 BSNDQ8WZ55 320 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 GOLGA1Q92805 767 aa28.96■■■□□ 2.23
COL13A1-210ENST00000517713 AJAP1Q9UKB5 411 aaPredicted RBP28.96■■■□□ 2.23
COL13A1-210ENST00000517713 SYNGAP1Q96PV0 1343 aa28.95■■■□□ 2.23
COL13A1-210ENST00000517713 ATP1A1P05023 1023 aaKnown RBP28.95■■■□□ 2.23
COL13A1-210ENST00000517713 SOX10P56693 466 aa28.95■■■□□ 2.23
COL13A1-210ENST00000517713 JAM2P57087 298 aa28.95■■■□□ 2.23
COL13A1-210ENST00000517713 IQCEQ6IPM2 695 aa28.95■■■□□ 2.23
COL13A1-210ENST00000517713 FBXO38Q6PIJ6 1188 aa28.95■■■□□ 2.23
COL13A1-210ENST00000517713 TRAPPC11Q7Z392 1133 aa28.95■■■□□ 2.23
COL13A1-210ENST00000517713 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.95■■■□□ 2.23
COL13A1-210ENST00000517713 ATP6V0A4Q9HBG4 840 aa28.95■■■□□ 2.23
COL13A1-210ENST00000517713 LUC7LQ9NQ29 371 aaKnown RBP28.95■■■□□ 2.23
COL13A1-210ENST00000517713 ZNF302Q9NR11 478 aa28.95■■■□□ 2.23
COL13A1-210ENST00000517713 PUF60Q9UHX1 559 aaKnown RBP28.95■■■□□ 2.23
COL13A1-210ENST00000517713 OSBPP22059 807 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 CHMP4BP1P59074 171 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 MYL7Q01449 175 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 TEX35Q5T0J7 233 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 PAPD7Q5XG87 772 aaKnown RBP28.94■■■□□ 2.22
COL13A1-210ENST00000517713 KIFC3Q9BVG8 833 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 TAF1DQ9H5J8 278 aaPredicted RBP28.94■■■□□ 2.22
COL13A1-210ENST00000517713 TXNRD2Q9NNW7 524 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 MAFBQ9Y5Q3 323 aaPredicted RBP28.94■■■□□ 2.22
COL13A1-210ENST00000517713 DENND3A2RUS2 1198 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 TACC1O75410 805 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 GJB7Q6PEY0 223 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 MAP4K3Q8IVH8 894 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 TRIM58Q8NG06 486 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 MLXIPQ9HAP2 919 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 XPNPEP1Q9NQW7 623 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 RBPJLQ9UBG7 517 aa28.94■■■□□ 2.22
COL13A1-210ENST00000517713 ANO9A1A5B4 782 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 MAPK13O15264 365 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 UBA1P22314 1058 aaKnown RBP28.93■■■□□ 2.22
COL13A1-210ENST00000517713 COPB2P35606 906 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 VAMP7P51809 220 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 RTP1P59025 263 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 R3HDMLQ9H3Y0 253 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 ADAMTS1Q9UHI8 967 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 A0A087X0T9 212 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 FAM228BP0C875 321 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 PTK2Q05397 1052 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 MTERF2Q49AM1 385 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 ZNF526Q8TF50 670 aaPredicted RBP28.93■■■□□ 2.22
COL13A1-210ENST00000517713 INTS2Q9H0H0 1204 aaKnown RBP28.93■■■□□ 2.22
COL13A1-210ENST00000517713 HDAC6Q9UBN7 1215 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 SAR1BQ9Y6B6 198 aa28.93■■■□□ 2.22
COL13A1-210ENST00000517713 MOCS3O95396 460 aa28.92■■■□□ 2.22
COL13A1-210ENST00000517713 H2AFXP16104 143 aaPredicted RBP28.92■■■□□ 2.22
COL13A1-210ENST00000517713 ATP4AP20648 1035 aa28.92■■■□□ 2.22
COL13A1-210ENST00000517713 PRKCIP41743 596 aa28.92■■■□□ 2.22
COL13A1-210ENST00000517713 DLG4P78352 724 aa28.92■■■□□ 2.22
COL13A1-210ENST00000517713 RABGGTAQ92696 567 aa28.92■■■□□ 2.22
COL13A1-210ENST00000517713 TFRCP02786 760 aaKnown RBP28.91■■■□□ 2.22
COL13A1-210ENST00000517713 Q3C1V9 767 aa28.91■■■□□ 2.22
COL13A1-210ENST00000517713 GPAT2Q6NUI2 795 aa28.91■■■□□ 2.22
COL13A1-210ENST00000517713 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.91■■■□□ 2.22
COL13A1-210ENST00000517713 ZNF571Q7Z3V5 609 aaPredicted RBP28.91■■■□□ 2.22
COL13A1-210ENST00000517713 GPR161Q8N6U8 529 aaKnown RBP28.91■■■□□ 2.22
COL13A1-210ENST00000517713 CAPN6Q9Y6Q1 641 aa28.91■■■□□ 2.22
COL13A1-210ENST00000517713 MYH9P35579 1960 aaKnown RBP28.91■■■□□ 2.22
COL13A1-210ENST00000517713 ANKRD63C9JTQ0 380 aa28.91■■■□□ 2.22
COL13A1-210ENST00000517713 OATP04181 439 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms