RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 WIPF3A6NGB9 483 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 LINC01548A6NM66 108 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 H3BRB1 525 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 PPP6CO00743 305 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 MAN2B1O00754 1011 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 DNAJA2O60884 412 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 H2AFYO75367 372 aaKnown RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 SPDEFO95238 335 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 IL18BPO95998 194 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 PLS3P13797 630 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 GM2AP17900 193 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 BCL6P41182 706 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 CSRP3P50461 194 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 RNASE9P60153 205 aaKnown RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 SAFB2Q14151 953 aaKnown RBP eCLIP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 TRIP6Q15654 476 aaKnown RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 KRTAP24-1Q3LI83 254 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 PAN2Q504Q3 1202 aaKnown RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 DCAF17Q5H9S7 520 aaPredicted RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 DAB2IPQ5VWQ8 1189 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZDHHC20Q5W0Z9 365 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 CD276Q5ZPR3 534 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 OVOS1Q6IE37 1185 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZNF549Q6P9A3 640 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZNF782Q6ZMW2 699 aaPredicted RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 AGMOQ6ZNB7 445 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 EP400NLQ6ZTU2 488 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 PIM3Q86V86 326 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 RIOX2Q8IUF8 465 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 KIAA0825Q8IV33 1275 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 WIPF2Q8TF74 440 aaPredicted RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 SARAFQ96BY9 339 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 ARMC5Q96C12 935 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 AIFM2Q9BRQ8 373 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 DCTN5Q9BTE1 182 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 SMOC1Q9H4F8 434 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 TUT1Q9H6E5 874 aaKnown RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 IL23AQ9NPF7 189 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 CLDND1Q9NY35 253 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 FAM8A1Q9UBU6 413 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 Q9UFV3 132 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 SPG7Q9UQ90 795 aa0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 COL2A1P02458 1487 aaPredicted RBP0.54□□□□□ -2.32
SNORA40.17-201ENST00000517256 PMS2P1A4D2B8 440 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 SRRM3A6NNA2 597 aaPredicted RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZNF839A8K0R7 811 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 AHRRA9YTQ3 701 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 ACOT8O14734 319 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 TNFRSF10CO14798 259 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 WNT9AO14904 365 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 GPR182O15218 404 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 TLR3O15455 904 aaKnown RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 PEX1O43933 1283 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 CDKL5O76039 1030 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 LDLRP01130 860 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 EGR2P11161 476 aaPredicted RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 RLBP1P12271 317 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 FAHP16930 419 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 NPR3P17342 541 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 TFE3P19532 575 aaPredicted RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 CD247P20963 164 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 BMPR1AP36894 532 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 CCNFP41002 786 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZXDBP98169 803 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 ELOAQ14241 798 aaKnown RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 SF1Q15637 639 aaKnown RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZYXQ15942 572 aaKnown RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 KIZQ2M2Z5 673 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 SNAP47Q5SQN1 464 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 LCE3EQ5T5B0 92 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 KRTAP5-7Q6L8G8 165 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 MIS18BP1Q6P0N0 1132 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 PROSER1Q86XN7 944 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 RBM12BQ8IXT5 1001 aaKnown RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 DPF3Q92784 378 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 DDX17Q92841 729 aaKnown RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 SLC7A6OSQ96CW6 309 aaPredicted RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 RNF31Q96EP0 1072 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 DMRTB1Q96MA1 342 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 TMEM79Q9BSE2 394 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 TMEM204Q9BSN7 226 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 NDC1Q9BTX1 674 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 GATA5Q9BWX5 397 aaPredicted RBP0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 GBP3Q9H0R5 595 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 SLC6A15Q9H2J7 730 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 EPB41L1Q9H4G0 881 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 SPON1Q9HCB6 807 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 POT1Q9NUX5 634 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 TLR6Q9Y2C9 796 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 PCDHB14Q9Y5E9 798 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 MAST3O60307 1309 aa0.53□□□□□ -2.32
SNORA40.17-201ENST00000517256 TP53BP1Q12888 1972 aaPredicted RBP0.52□□□□□ -2.33
SNORA40.17-201ENST00000517256 A0A087WYN8 130 aa0.52□□□□□ -2.33
SNORA40.17-201ENST00000517256 GRXCR1A8MXD5 290 aa0.52□□□□□ -2.33
SNORA40.17-201ENST00000517256 C9IYK1 514 aa0.52□□□□□ -2.33
SNORA40.17-201ENST00000517256 F6X3S4 739 aa0.52□□□□□ -2.33
SNORA40.17-201ENST00000517256 GIPC1O14908 333 aa0.52□□□□□ -2.33
SNORA40.17-201ENST00000517256 BRINP1O60477 761 aa0.52□□□□□ -2.33
SNORA40.17-201ENST00000517256 DDNO94850 711 aaPredicted RBP0.52□□□□□ -2.33
SNORA40.17-201ENST00000517256 BAG4O95429 457 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms