RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 GPR158Q5T848 1215 aa7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 CLEC14AQ86T13 490 aa7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 ANKRD53Q8N9V6 530 aa7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 SHCBP1Q8NEM2 672 aa7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 SLC5A5Q92911 643 aa7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 NOL10Q9BSC4 688 aaKnown RBP7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 FAM126AQ9BYI3 521 aaPredicted RBP7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 ANO3Q9BYT9 981 aa7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 PPP2R3BQ9Y5P8 575 aa7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 SLC30A1Q9Y6M5 507 aa7.43□□□□□ -1.22
SCARNA1-201ENST00000517138 H2AFYO75367 372 aaKnown RBP7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 LSP1P33241 339 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 MSX2P35548 267 aaPredicted RBP7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 BPIFB4P59827 614 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 TCIRG1Q13488 830 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 DHCR24Q15392 516 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 DDB1Q16531 1140 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 ZXDCQ2QGD7 858 aaPredicted RBP7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 SPDYAQ5MJ70 313 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 ESPNLQ6ZVH7 1005 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 DDX46Q7L014 1031 aaKnown RBP7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 CXorf67Q86X51 503 aaPredicted RBP7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 USP7Q93009 1102 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 SLC7A6OSQ96CW6 309 aaPredicted RBP7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 ADOQ96SZ5 270 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 KRTAP4-2Q9BYR5 136 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 PLA2G3Q9NZ20 509 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 TMPRSS11EQ9UL52 423 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 TSC22D4Q9Y3Q8 395 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 TCAF1Q9Y4C2 921 aa7.42□□□□□ -1.22
SCARNA1-201ENST00000517138 KDM1AO60341 852 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 PFKMP08237 780 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 ACO1P21399 889 aaKnown RBP7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 COMTP21964 271 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 OCRLQ01968 901 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 PDCD1Q15116 288 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 LHFPL2Q6ZUX7 228 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 ADGRE4PQ86SQ3 457 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 LYSMD2Q8IV50 215 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 CMIPQ8IY22 773 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 ZNF808Q8N4W9 903 aaPredicted RBP7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 PLA2G15Q8NCC3 412 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 CLRN3Q8NCR9 226 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 SH3RF3Q8TEJ3 882 aaPredicted RBP7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 RABGGTAQ92696 567 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 GCDHQ92947 438 aaPredicted RBP7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 GFM2Q969S9 779 aaKnown RBP7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 FDXACB1Q9BRP7 624 aaPredicted RBP7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 KRTAP4-11Q9BYQ6 195 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 SLC6A15Q9H2J7 730 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 USP18Q9UMW8 372 aa7.41□□□□□ -1.22
SCARNA1-201ENST00000517138 C1QTNF3-AMACRE9PGA6 284 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 MUSKO15146 869 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 MATN3O15232 486 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 TOX4O94842 621 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 MANFP55145 182 aaKnown RBP7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 GRM7Q14831 915 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 EGFLAMQ63HQ2 1017 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 C11orf74Q86VG3 221 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 PIK3C3Q8NEB9 887 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 FERMT2Q96AC1 680 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 SLKQ9H2G2 1235 aaPredicted RBP7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 IFT22Q9H7X7 185 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 CAAP1Q9H8G2 361 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 VTA1Q9NP79 307 aa7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 USP36Q9P275 1121 aaKnown RBP7.4□□□□□ -1.22
SCARNA1-201ENST00000517138 PLSCR1O15162 318 aa7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 TNFRSF1AP19438 455 aa7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 RPS19P39019 145 aaKnown RBP7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 SESN2P58004 480 aaPredicted RBP7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 CD69Q07108 199 aa7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 TRIM25Q14258 630 aaKnown RBP7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 MAMDC4Q6UXC1 1216 aa7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 POLNQ7Z5Q5 900 aa7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 AFAP1L2Q8N4X5 818 aa7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 TOPORSQ9NS56 1045 aaPredicted RBP7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 EDARQ9UNE0 448 aa7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 PCDHB6Q9Y5E3 794 aa7.39□□□□□ -1.23
SCARNA1-201ENST00000517138 A0A1W2PRX2 142 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 CT83Q5H943 113 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 CCDC62Q6P9F0 684 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 DBX2Q6ZNG2 339 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 FRMD7Q6ZUT3 714 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 GAREM2Q75VX8 874 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 HDGFL2Q7Z4V5 671 aaPredicted RBP7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 SLC41A1Q8IVJ1 513 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 PPP1R14CQ8TAE6 165 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 CHAC2Q8WUX2 184 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 HIST1H2AHQ96KK5 128 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 TTC1Q99614 292 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 HIST1H2AJQ99878 128 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 ING3Q9NXR8 418 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 MYRFQ9Y2G1 1151 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 SH3BP1Q9Y3L3 701 aa7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 NOC2LQ9Y3T9 749 aaKnown RBP7.38□□□□□ -1.23
SCARNA1-201ENST00000517138 UBE2QL1A1L167 161 aa7.37□□□□□ -1.23
SCARNA1-201ENST00000517138 PMS2P1A4D2B8 440 aa7.37□□□□□ -1.23
SCARNA1-201ENST00000517138 LPLP06858 475 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms