RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 CDK11AQ9UQ88 783 aaPredicted RBP3.86□□□□□ -1.79
SCARNA16.2-201ENST00000516520 REXO2Q9Y3B8 237 aaKnown RBP3.86□□□□□ -1.79
SCARNA16.2-201ENST00000516520 A0A087X1B8 175 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 CBX4O00257 560 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 TRAF5O00463 557 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 IPO13O94829 963 aaKnown RBP3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 STAT3P40763 770 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 ANTXR2P58335 489 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 ADAM8P78325 824 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 ELAVL1Q15717 326 aaKnown RBP3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 MAN2A1Q16706 1144 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 FKBP15Q5T1M5 1219 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 PIK3R6Q5UE93 754 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 FNDC7Q5VTL7 733 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 TIGD7Q6NT04 549 aaPredicted RBP3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 SYNPOQ8N3V7 929 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 ARL8AQ96BM9 186 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 MRFAP1L1Q96HT8 127 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 CLUHP3Q96NS8 147 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 C11orf21Q9P2W6 132 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 MAGEL2Q9UJ55 1249 aa3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 TNPO3Q9Y5L0 923 aaKnown RBP3.85□□□□□ -1.79
SCARNA16.2-201ENST00000516520 UBE2QL1A1L167 161 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 GOLGA6L6A8MZA4 724 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 MTSS1O43312 755 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 MFAP3LO75121 409 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 RFPL3O75679 317 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 TOX4O94842 621 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 PTGS2P35354 604 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 SCNN1GP51170 649 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 ADCY2Q08462 1091 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 ZNF460Q14592 562 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 BMS1Q14692 1282 aaKnown RBP3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 Q6ZRM9 215 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 MRGPRGQ86SM5 289 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 SREK1Q8WXA9 508 aaKnown RBP3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 CLIP3Q96DZ5 547 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 DNAJC2Q99543 621 aaKnown RBP3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 GPR87Q9BY21 358 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 PITHD1Q9GZP4 211 aaPredicted RBP3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 IKZF4Q9H2S9 585 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 INTS7Q9NVH2 962 aaKnown RBP3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 MAGEC2Q9UBF1 373 aaPredicted RBP3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 DNAI1Q9UI46 699 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 SPO11Q9Y5K1 396 aa3.84□□□□□ -1.79
SCARNA16.2-201ENST00000516520 A0A0A6YYJ9 748 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 TMEM191CA6NGB0 347 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NRP1O14786 923 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PPFIA4O75335 1185 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 FSBPO95073 299 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 JMJD7P0C870 316 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PTX3P26022 381 aaPredicted RBP3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 NPEPPSP55786 919 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SQSTM1Q13501 440 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 TOB2Q14106 344 aaPredicted RBP3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 MYBPC3Q14896 1274 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ACAP1Q15027 740 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 CFAP100Q494V2 611 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 CDCA2Q69YH5 1023 aaPredicted RBP3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 KIAA1841Q6NSI8 718 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 KANSL1Q7Z3B3 1105 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 LDLRAD3Q86YD5 345 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 LARP4BQ92615 738 aaKnown RBP3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 HIST1H2AHQ96KK5 128 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 HIST1H2AJQ99878 128 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ORAI3Q9BRQ5 295 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 OSBPL6Q9BZF3 934 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ZKSCAN5Q9Y2L8 839 aa3.83□□□□□ -1.8
SCARNA16.2-201ENST00000516520 GAS7O60861 476 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 GNAT2P19087 354 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SLC9A1P19634 815 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 KIR2DL3P43628 341 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SPIDRQ14159 915 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 DCAF17Q5H9S7 520 aaPredicted RBP3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ESRP1Q6NXG1 681 aaKnown RBP3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 HTR3DQ70Z44 454 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 KIF18BQ86Y91 864 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PASD1Q8IV76 773 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ULK2Q8IYT8 1036 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 CMTM4Q8IZR5 234 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 MDGA1Q8NFP4 955 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SH3TC2Q8TF17 1288 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 UIMC1Q96RL1 719 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ELF4Q99607 663 aaPredicted RBP3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 MTG2Q9H4K7 406 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SLC2A4RGQ9NR83 387 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 TOMM22Q9NS69 142 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 TMEM260Q9NX78 707 aa3.82□□□□□ -1.8
SCARNA16.2-201ENST00000516520 XDHP47989 1333 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 KLRG2A4D1S0 409 aaPredicted RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 OPHN1O60890 802 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 RAMP2O60895 175 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PPFIA2O75334 1257 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 PRPF6O94906 941 aaKnown RBP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 APOL3O95236 402 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 ASMTLO95671 621 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 HNRNPLP14866 589 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 SDSP20132 328 aa3.81□□□□□ -1.8
SCARNA16.2-201ENST00000516520 CD40P25942 277 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms