RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 BEND2Q8NDZ0 799 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 ERCC4Q92889 916 aaPredicted RBP2.56□□□□□ -2
RNU6-561P-201ENST00000516222 ZNF428Q96B54 188 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 MYEOVQ96EZ4 313 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 COQ10AQ96MF6 247 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 WDR92Q96MX6 357 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 DCLRE1CQ96SD1 692 aaKnown RBP2.56□□□□□ -2
RNU6-561P-201ENST00000516222 BRIP1Q9BX63 1249 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 SLC46A2Q9BY10 475 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 SERHL2Q9H4I8 314 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 SYNPO2LQ9H987 977 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 HS3ST4Q9Y661 456 aa2.56□□□□□ -2
RNU6-561P-201ENST00000516222 GAGE12BA1L429 117 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 C2orf78A6NCI8 922 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 GAGE12HA6NDE8 117 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 ZNF561-AS1K7EIQ3 104 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 RNASET2O00584 256 aaKnown RBP2.55□□□□□ -2
RNU6-561P-201ENST00000516222 TOX4O94842 621 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 HK1P19367 917 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 SDHAP31040 664 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 ZEB1P37275 1124 aaPredicted RBP2.55□□□□□ -2
RNU6-561P-201ENST00000516222 KRTAP10-9P60411 292 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 SUMO1P63165 101 aaKnown RBP2.55□□□□□ -2
RNU6-561P-201ENST00000516222 GABREP78334 506 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 SPIDRQ14159 915 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 ACAP1Q15027 740 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 MAN2A1Q16706 1144 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 METTL24Q5JXM2 366 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 ASXL2Q76L83 1435 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 FAM83AQ86UY5 434 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 CMTR2Q8IYT2 770 aaKnown RBP2.55□□□□□ -2
RNU6-561P-201ENST00000516222 RPGRQ92834 1020 aaKnown RBP2.55□□□□□ -2
RNU6-561P-201ENST00000516222 ZNF669Q96BR6 464 aaPredicted RBP2.55□□□□□ -2
RNU6-561P-201ENST00000516222 CPPED1Q9BRF8 314 aaPredicted RBP2.55□□□□□ -2
RNU6-561P-201ENST00000516222 SLC29A3Q9BZD2 475 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 C14orf93Q9H972 538 aaKnown RBP2.55□□□□□ -2
RNU6-561P-201ENST00000516222 ARHGEF4Q9NR80 690 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 KCMF1Q9P0J7 381 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 CBLCQ9ULV8 474 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 CLCA2Q9UQC9 943 aa2.55□□□□□ -2
RNU6-561P-201ENST00000516222 SLC12A8A0AV02 714 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 ARVCFO00192 962 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 KCNK3O14649 394 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 NRP1O14786 923 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 KIR2DL3P43628 341 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 ALDH6A1Q02252 535 aaKnown RBP2.54□□□□□ -2
RNU6-561P-201ENST00000516222 DDR2Q16832 855 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 PRR16Q569H4 304 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 TMCO4Q5TGY1 634 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 SP5Q6BEB4 398 aaPredicted RBP2.54□□□□□ -2
RNU6-561P-201ENST00000516222 Q6YL49 198 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 ARHGEF19Q8IW93 802 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 DYDC2Q96IM9 177 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 FOXB1Q99853 325 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 WDR11Q9BZH6 1224 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 KCNH6Q9H252 994 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 SMURF1Q9HCE7 757 aa2.54□□□□□ -2
RNU6-561P-201ENST00000516222 TRBV23-1A0A0A0MS06 115 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 CENPVL1A0A0U1RR11 272 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 MYADML2A6NDP7 307 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 DIRC3C9JPN6 131 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 FSBPO95073 299 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 SPATA31D3P0C874 917 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 NR4A1P22736 598 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 CLK3P49761 638 aaKnown RBP2.53□□□□□ -2
RNU6-561P-201ENST00000516222 BCAR1P56945 870 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 GUCY1B3Q02153 619 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 ARID5AQ03989 594 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 CCDC62Q6P9F0 684 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 SPATA31D4Q6ZUB0 917 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 ANKS3Q6ZW76 656 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 CLEC14AQ86T13 490 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 NME9Q86XW9 330 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 C2orf69Q8N8R5 385 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 BOLLQ8N9W6 283 aaKnown RBP2.53□□□□□ -2
RNU6-561P-201ENST00000516222 OR5AN1Q8NGI8 311 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 MAGEB10Q96LZ2 347 aaPredicted RBP2.53□□□□□ -2
RNU6-561P-201ENST00000516222 UIMC1Q96RL1 719 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 PDCD2LQ9BRP1 358 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 DUSP26Q9BV47 211 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 SPATA9Q9BWV2 254 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 R3HDMLQ9H3Y0 253 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 ZNF408Q9H9D4 720 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 POLR3BQ9NW08 1133 aaPredicted RBP2.53□□□□□ -2
RNU6-561P-201ENST00000516222 TRPM5Q9NZQ8 1165 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 RNF181Q9P0P0 153 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 ANKFY1Q9P2R3 1169 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 TESQ9UGI8 421 aaKnown RBP2.53□□□□□ -2
RNU6-561P-201ENST00000516222 MAGEL2Q9UJ55 1249 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 TLK1Q9UKI8 766 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 PCDHA9Q9Y5H5 950 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 B3GALT1Q9Y5Z6 326 aa2.53□□□□□ -2
RNU6-561P-201ENST00000516222 TMEM200CA6NKL6 621 aa2.52□□□□□ -2.01
RNU6-561P-201ENST00000516222 GRXCR1A8MXD5 290 aa2.52□□□□□ -2.01
RNU6-561P-201ENST00000516222 MTSS1O43312 755 aa2.52□□□□□ -2.01
RNU6-561P-201ENST00000516222 HOXA3O43365 443 aaPredicted RBP2.52□□□□□ -2.01
RNU6-561P-201ENST00000516222 DNAJC6O75061 913 aa2.52□□□□□ -2.01
RNU6-561P-201ENST00000516222 EFCAB14O75071 495 aa2.52□□□□□ -2.01
RNU6-561P-201ENST00000516222 ZFPL1O95159 310 aa2.52□□□□□ -2.01
RNU6-561P-201ENST00000516222 NDUFA10O95299 355 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms