RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 ZNF460Q14592 562 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 MAN2A1Q16706 1144 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 CFAP100Q494V2 611 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 FNDC7Q5VTL7 733 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 KRT40Q6A162 431 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 MFSD5Q6N075 450 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 ZZZ3Q8IYH5 903 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 SYNPOQ8N3V7 929 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 C7orf31Q8N865 590 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 NEU4Q8WWR8 484 aaPredicted RBP4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 CEP89Q96ST8 783 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 HAPLN2Q9GZV7 340 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 MMRN2Q9H8L6 949 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 IL23AQ9NPF7 189 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 INTS7Q9NVH2 962 aaKnown RBP4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 MAGEC2Q9UBF1 373 aaPredicted RBP4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 RCAN3Q9UKA8 241 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 REXO2Q9Y3B8 237 aaKnown RBP4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 TOX4O94842 621 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 JMJD7P0C870 316 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 PTX3P26022 381 aaPredicted RBP4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 SCNN1GP51170 649 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 ADAM8P78325 824 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 SMAD3P84022 425 aaKnown RBP4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 ADCY2Q08462 1091 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 MYBPC3Q14896 1274 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 ACAP1Q15027 740 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 ELAVL1Q15717 326 aaKnown RBP4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 CDCA2Q69YH5 1023 aaPredicted RBP4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 KANSL1Q7Z3B3 1105 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 KIF18BQ86Y91 864 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 PHYKPLQ8IUZ5 450 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 SH3TC2Q8TF17 1288 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 ELF4Q99607 663 aaPredicted RBP4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 ORAI3Q9BRQ5 295 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 OSBPL6Q9BZF3 934 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 PITHD1Q9GZP4 211 aaPredicted RBP4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 ZSWIM4Q9H7M6 989 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 C14orf93Q9H972 538 aaKnown RBP4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 ZKSCAN5Q9Y2L8 839 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 SPO11Q9Y5K1 396 aa4.38□□□□□ -1.71
RNU4-49P-201ENST00000516080 A0A0A6YYJ9 748 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 PPP1R12AO14974 1030 aaPredicted RBP4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 MFAP3LO75121 409 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 SLC9A1P19634 815 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 SDSP20132 328 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 INHBEP58166 350 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 SMN1Q16637 294 aaKnown RBP4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 FKBP15Q5T1M5 1219 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 Q6ZRM9 215 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 CLIP3Q96DZ5 547 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 PRRX2Q99811 253 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 GPR87Q9BY21 358 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 IKZF4Q9H2S9 585 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 TOMM22Q9NS69 142 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 IFT57Q9NWB7 429 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 OXSMQ9NWU1 459 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 TMEM260Q9NX78 707 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 DNAI1Q9UI46 699 aa4.37□□□□□ -1.71
RNU4-49P-201ENST00000516080 A0A087X1B8 175 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 GOLGA6L6A8MZA4 724 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 MTSS1O43312 755 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 IPO13O94829 963 aaKnown RBP4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 PRPF6O94906 941 aaKnown RBP4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 FSBPO95073 299 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 APOL3O95236 402 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 ASMTLO95671 621 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 KIR2DL3P43628 341 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 NPEPPSP55786 919 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 PABPC4Q13310 644 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 KIAA1841Q6NSI8 718 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 ESRP1Q6NXG1 681 aaKnown RBP4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 PASD1Q8IV76 773 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 CMTM4Q8IZR5 234 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 LARP4BQ92615 738 aaKnown RBP4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 ARL8AQ96BM9 186 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 MTG2Q9H4K7 406 aa4.36□□□□□ -1.71
RNU4-49P-201ENST00000516080 GAS7O60861 476 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 OPHN1O60890 802 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 HNRNPLP14866 589 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 CD40P25942 277 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 TOB2Q14106 344 aaPredicted RBP4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 LRRC32Q14392 662 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 TCEA2Q15560 299 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 CREB3L3Q68CJ9 461 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 HTR3DQ70Z44 454 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 MRGPRGQ86SM5 289 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 ULK2Q8IYT8 1036 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 MDGA1Q8NFP4 955 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 HIST1H2AHQ96KK5 128 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 ZNF512Q96ME7 567 aaPredicted RBP4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 UIMC1Q96RL1 719 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 HIST1H2AJQ99878 128 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 MYL10Q9BUA6 226 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 POFUT1Q9H488 388 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 SLC2A4RGQ9NR83 387 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 NCDNQ9UBB6 729 aa4.35□□□□□ -1.71
RNU4-49P-201ENST00000516080 XDHP47989 1333 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms