RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 PDILTQ8N807 584 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 DBF4BQ8NFT6 615 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 LRRC15Q8TF66 581 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 HERVK_113Q902F9 699 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNF8-215ENST00000515572 FDXACB1Q9BRP7 624 aaPredicted RBP13.19□□□□□ -0.3
SNF8-215ENST00000515572 RUSC1Q9BVN2 902 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 NFKBIZQ9BYH8 718 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 GPRC5CQ9NQ84 441 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
SNF8-215ENST00000515572 FAM237AA0A1B0GTK4 181 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 HIP1RO75146 1068 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 SRGAP2CP0DJJ0 459 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNF8-215ENST00000515572 GLRA2P23416 452 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 CD52P31358 61 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 CAPSQ13938 189 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 E2F4Q16254 413 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 NAALADL2Q58DX5 795 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 TDHQ8IZJ6 230 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 TMEM40Q8WWA1 233 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 DHX58Q96C10 678 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 FTHL17Q9BXU8 183 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 PANK2Q9BZ23 570 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 AGO3Q9H9G7 860 aaKnown RBP13.18□□□□□ -0.3
SNF8-215ENST00000515572 IFT122Q9HBG6 1241 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 HPSEQ9Y251 543 aa13.18□□□□□ -0.3
SNF8-215ENST00000515572 NOC2LQ9Y3T9 749 aaKnown RBP13.18□□□□□ -0.3
SNF8-215ENST00000515572 POLR2DO15514 142 aaKnown RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 KRT18P05783 430 aaKnown RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 PFKFB1P16118 471 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 PTENP60484 403 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 AMPD3Q01432 767 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 DMP1Q13316 513 aaPredicted RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 SHHQ15465 462 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 ARSHQ5FYA8 562 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 RASIP1Q5U651 963 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 OTOP2Q7RTS6 562 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 FAM228AQ86W67 206 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 ZBTB8OSQ8IWT0 167 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 DEPTORQ8TB45 409 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 MRPS27Q92552 414 aaKnown RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 ZNF668Q96K58 619 aaPredicted RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 OSBPL7Q9BZF2 842 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 C2orf40Q9H1Z8 148 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 KBTBD4Q9NVX7 518 aa13.17□□□□□ -0.3
SNF8-215ENST00000515572 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
SNF8-215ENST00000515572 PHLPP2Q6ZVD8 1323 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
SNF8-215ENST00000515572 PLS3P13797 630 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 SCP2P22307 547 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 KCNJ6P48051 423 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 EFNA5P52803 228 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 NFX1Q12986 1120 aaKnown RBP13.16□□□□□ -0.3
SNF8-215ENST00000515572 MAPK7Q13164 816 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 C9orf50Q5SZB4 431 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
SNF8-215ENST00000515572 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 CEP57L1Q8IYX8 460 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 DAW1Q8N136 415 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 TMEM87AQ8NBN3 555 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
SNF8-215ENST00000515572 MYMKA6NI61 221 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 ZBBXA8MT70 800 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 H0YCG3 227 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 ERLIN2O94905 339 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 FAM13AO94988 1023 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 AMHP03971 560 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 SLFN14P0C7P3 912 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 SYKP43405 635 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 NDUFA8P51970 172 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 ZNF131P52739 623 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 SMTNP53814 917 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 PEX3P56589 373 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
SNF8-215ENST00000515572 RAD51AP2Q09MP3 1159 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 GIT2Q14161 759 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 CATSPER4Q7RTX7 472 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 PHOSPHO2Q8TCD6 241 aa13.15□□□□□ -0.3
SNF8-215ENST00000515572 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms