RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 SLC7A6OSQ96CW6 309 aaPredicted RBP6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 LOXL4Q96JB6 756 aa6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 RBM15Q96T37 977 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 TOPORSQ9NS56 1045 aaPredicted RBP6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 CNOT11Q9UKZ1 510 aaKnown RBP6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 ATP8A1Q9Y2Q0 1164 aa6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 CTDP1Q9Y5B0 961 aaPredicted RBP6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 PPP2R3BQ9Y5P8 575 aa6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 RBM8AQ9Y5S9 174 aaKnown RBP6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 GOLGA8BA8MQT2 603 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 FSBPO95073 299 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 PFKMP08237 780 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 MANFP55145 182 aaKnown RBP6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 LHFPL2Q6ZUX7 228 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 DDX42Q86XP3 938 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 GAB3Q8WWW8 586 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 RSAD2Q8WXG1 361 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 NKD2Q969F2 451 aaPredicted RBP6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 ACAP3Q96P50 834 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 GNRHR2Q96P88 292 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 FAM126AQ9BYI3 521 aaPredicted RBP6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 HAPLN2Q9GZV7 340 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 MEGF9Q9H1U4 602 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 OAZ3Q9UMX2 235 aa6.64□□□□□ -1.35
SMARCA5-203ENST00000515531 GOLGA8AA7E2F4 631 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 PRRG2O14669 202 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 GPR42O15529 346 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 NRP2O60462 931 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 HNRNPLP14866 589 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 GPR15P49685 360 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 NRG3P56975 720 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 ATP2C1P98194 919 aaPredicted RBP6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 UGT8Q16880 541 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 CT83Q5H943 113 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 PLA2G15Q8NCC3 412 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 AHCYL2Q96HN2 611 aaKnown RBP6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 DPYSL5Q9BPU6 564 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 OSBPL6Q9BZF3 934 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 SLC6A15Q9H2J7 730 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 SHROOM4Q9ULL8 1493 aa6.63□□□□□ -1.35
SMARCA5-203ENST00000515531 NCANO14594 1321 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 C2orf78A6NCI8 922 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 B8ZZF3 427 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 PPARAQ07869 468 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 PDCD1Q15116 288 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 CCDC178Q5BJE1 867 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 OR14C36Q8NHC7 312 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 ZCRB1Q8TBF4 217 aaKnown RBP6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 SAMD11Q96NU1 681 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 UIMC1Q96RL1 719 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 SSBP3Q9BWW4 388 aaPredicted RBP6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 MSL2Q9HCI7 577 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 PRSS50Q9UI38 385 aa6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 ZFR2Q9UPR6 939 aaKnown RBP6.62□□□□□ -1.35
SMARCA5-203ENST00000515531 SLC26A4O43511 780 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 LPLP06858 475 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 POU3F3P20264 500 aaPredicted RBP6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 RPS19P39019 145 aaKnown RBP6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 ADCY7P51828 1080 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 SCAND1P57086 179 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 BPIFB4P59827 614 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 HGFACQ04756 655 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 TCIRG1Q13488 830 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 FSCN1Q16658 493 aaKnown RBP6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 KRT40Q6A162 431 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 LMBR1LQ6UX01 489 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 FAM177A1Q8N128 213 aaPredicted RBP6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 ANKRD53Q8N9V6 530 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 SHCBP1Q8NEM2 672 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 CFHR4Q92496 578 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 EAF2Q96CJ1 260 aaPredicted RBP6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 RPL10LQ96L21 214 aaKnown RBP6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 DEF6Q9H4E7 631 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 VTA1Q9NP79 307 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 C14orf119Q9NWQ9 140 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 SMPD4Q9NXE4 827 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 SLC5A4Q9NY91 659 aa6.61□□□□□ -1.35
SMARCA5-203ENST00000515531 PHLDB1Q86UU1 1377 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 A0A0A6YYK5 440 aaPredicted RBP6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 ANKRD62A6NC57 917 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 MATN2O00339 956 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 PRKD3O94806 890 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 ENPP1P22413 925 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 LGALS4P56470 323 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 ACAP1Q15027 740 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 PITRM1Q5JRX3 1037 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 TCTN3Q6NUS6 607 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 CLEC14AQ86T13 490 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 GLB1L2Q8IW92 636 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 COG1Q8WTW3 980 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 RABGGTAQ92696 567 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 RAX2Q96IS3 184 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 OR14A2Q96R54 314 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 SOX7Q9BT81 388 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 KCTD10Q9H3F6 313 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 NELFAQ9H3P2 528 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 C14orf93Q9H972 538 aaKnown RBP6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 ST6GALNAC2Q9UJ37 374 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 TMPRSS11EQ9UL52 423 aa6.6□□□□□ -1.35
SMARCA5-203ENST00000515531 EDARQ9UNE0 448 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms