RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 MAP3K20Q9NYL2 800 aaKnown RBP17.13■□□□□ 0.33
TRIM41-207ENST00000515223 IFNAR2P48551 515 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 YWHAHQ04917 246 aaPredicted RBP17.12■□□□□ 0.33
TRIM41-207ENST00000515223 CENPUQ71F23 418 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 MB21D1Q8N884 522 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 CFAP36Q96G28 342 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 DYRK4Q9NR20 520 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 TOM1L1O75674 476 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 CDC27P30260 824 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 SCG3Q8WXD2 468 aaKnown RBP17.12■□□□□ 0.33
TRIM41-207ENST00000515223 ZBTB18Q99592 522 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 TRIM62Q9BVG3 475 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 ATP8A1Q9Y2Q0 1164 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 PCDHA13Q9Y5I0 950 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 F5H6K3 240 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 KLRC3Q07444 240 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 HP1BP3Q5SSJ5 553 aaPredicted RBP17.12■□□□□ 0.33
TRIM41-207ENST00000515223 SWSAP1Q6NVH7 229 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 MRPL4Q9BYD3 311 aaKnown RBP17.12■□□□□ 0.33
TRIM41-207ENST00000515223 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 NCAPD2Q15021 1401 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 OPHN1O60890 802 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 MAGEA9P43362 315 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 UNC13DQ70J99 1090 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
TRIM41-207ENST00000515223 ASIC4Q96FT7 647 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 KBTBD13C9JR72 458 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 CYP2D6P10635 497 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 ALKBH5Q6P6C2 394 aaKnown RBP17.12■□□□□ 0.33
TRIM41-207ENST00000515223 TTC13Q8NBP0 860 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 FBXL13Q8NEE6 735 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 PYROXD1Q8WU10 500 aa17.12■□□□□ 0.33
TRIM41-207ENST00000515223 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 FAM196BA6NMK8 535 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 CALB1P05937 261 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 PDCLQ13371 301 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 DRP2Q13474 957 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 KYAT1Q16773 422 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ANKRD20A4Q4UJ75 823 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ANKRD20A8PQ5CZ79 823 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ANKRD20A2Q5SQ80 823 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ANKRD20A1Q5TYW2 823 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 RBM41Q96IZ5 413 aaKnown RBP17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ZNF212Q9UDV6 495 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 TRAPPC3O43617 180 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 APOEP02649 317 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 PTK2BQ14289 1009 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ADGRG1Q9Y653 693 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 HECW2Q9P2P5 1572 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ARHGAP31Q2M1Z3 1444 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ESRRBO95718 433 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 TBXAS1P24557 533 aaPredicted RBP17.11■□□□□ 0.33
TRIM41-207ENST00000515223 ACCSLQ4AC99 568 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 IQANK1A0A1B0GTG1 560 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 EXOC1LA0A1B0GW35 172 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 CYP2C19P33261 490 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
TRIM41-207ENST00000515223 EDEM3Q9BZQ6 932 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
TRIM41-207ENST00000515223 SDC4P31431 198 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 PSMC5P62195 406 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 OCRLQ01968 901 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 USP17L6PQ6QN14 398 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 SNX19Q92543 992 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 FAF2Q96CS3 445 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ZNF560Q96MR9 790 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 FAM213AQ9BRX8 229 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ALDH8A1Q9H2A2 487 aaPredicted RBP17.1■□□□□ 0.33
TRIM41-207ENST00000515223 NFU1Q9UMS0 254 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ITM2BQ9Y287 266 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 SUGT1Q9Y2Z0 365 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 CRB1P82279 1406 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ERCC6L2Q5T890 1561 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 PFKFB3Q16875 520 aaPredicted RBP17.1■□□□□ 0.33
TRIM41-207ENST00000515223 MB21D2Q8IYB1 491 aaPredicted RBP17.1■□□□□ 0.33
TRIM41-207ENST00000515223 CEP95Q96GE4 821 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 SUN2Q9UH99 717 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 SNX2O60749 519 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 TMCC1O94876 653 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ANGPTL8Q6UXH0 198 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ADGRB3O60242 1522 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 SPECC1L-ADORA2AF8WAN1 911 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 SLC16A4O15374 487 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 GCKP35557 465 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
TRIM41-207ENST00000515223 GIPC2Q8TF65 315 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 DNAJC12Q9UKB3 198 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 UBE4BO95155 1302 aa17.1■□□□□ 0.33
TRIM41-207ENST00000515223 RALAP11233 206 aa17.09■□□□□ 0.33
TRIM41-207ENST00000515223 TEX2Q8IWB9 1127 aa17.09■□□□□ 0.33
TRIM41-207ENST00000515223 EXT2Q93063 718 aa17.09■□□□□ 0.33
TRIM41-207ENST00000515223 SEL1LQ9UBV2 794 aa17.09■□□□□ 0.33
TRIM41-207ENST00000515223 SH3BGRP55822 239 aaPredicted RBP17.09■□□□□ 0.33
TRIM41-207ENST00000515223 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
TRIM41-207ENST00000515223 DCP1AQ9NPI6 582 aaPredicted RBP17.09■□□□□ 0.33
TRIM41-207ENST00000515223 CPSF2Q9P2I0 782 aaKnown RBP17.09■□□□□ 0.33
TRIM41-207ENST00000515223 PEX19P40855 299 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms