RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 ARID2Q68CP9 1835 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 ZMYM2Q9UBW7 1377 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 PHLPP2Q6ZVD8 1323 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 ASB14A6NK59 587 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 PES1O00541 588 aaKnown RBP11.19□□□□□ -0.62
SNF8-214ENST00000515174 BACH1O14867 736 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNF8-214ENST00000515174 AKAP3O75969 853 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 AFPP02771 609 aaKnown RBP11.19□□□□□ -0.62
SNF8-214ENST00000515174 XRCC5P13010 732 aaKnown RBP11.19□□□□□ -0.62
SNF8-214ENST00000515174 KCNH2Q12809 1159 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 METTL7BQ6UX53 244 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 EXOC8Q8IYI6 725 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 GPRC5AQ8NFJ5 357 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 NEK11Q8NG66 645 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 SEPT1Q8WYJ6 367 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 EEF2KMTQ96G04 330 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 ZNF333Q96JL9 665 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 C16orf45Q96MC5 204 aaPredicted RBP11.19□□□□□ -0.62
SNF8-214ENST00000515174 CCDC43Q96MW1 224 aaKnown RBP11.19□□□□□ -0.62
SNF8-214ENST00000515174 MMP19Q99542 508 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 CYP26B1Q9NR63 512 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 AGPAT3Q9NRZ7 376 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 AGPAT5Q9NUQ2 364 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 CEP72Q9P209 647 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 MYO1AQ9UBC5 1043 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 DDX41Q9UJV9 622 aaKnown RBP11.19□□□□□ -0.62
SNF8-214ENST00000515174 EXOC7Q9UPT5 735 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 DIS3Q9Y2L1 958 aaKnown RBP11.19□□□□□ -0.62
SNF8-214ENST00000515174 PTCH2Q9Y6C5 1203 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 TRIOBPQ9H2D6 2365 aa11.19□□□□□ -0.62
SNF8-214ENST00000515174 GSTTP1A0A1W2PQM5 241 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 SSU72P8A0A1W2PR75 194 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 RBM47A0AV96 593 aaKnown RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 SOWAHDA6NJG2 315 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 EIF3CLB5ME19 914 aaKnown RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 P4HA2O15460 535 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 LGR5O75473 907 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 FARP2O94887 1054 aaPredicted RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 NDUFA10O95299 355 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 LCA5LO95447 670 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 CYLC1P35663 651 aaPredicted RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 SLC26A2P50443 739 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 KRT83P78385 493 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 KCNA1Q09470 495 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 MAPK8IP2Q13387 824 aaPredicted RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 IRF5Q13568 498 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 HSP90AA2PQ14568 343 aaPredicted RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 TAF1CQ15572 869 aaPredicted RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 ZC2HC1CQ53FD0 456 aaPredicted RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 DPY19L2P1Q6NXN4 242 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 CCDC62Q6P9F0 684 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 TOGARAM2Q6ZUX3 1019 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 HAUS6Q7Z4H7 955 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 CCDC60Q8IWA6 550 aaPredicted RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 TMEM161BQ8NDZ6 487 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 BAP1Q92560 729 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 DPF3Q92784 378 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 SLC35C1Q96A29 364 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 FAM167AQ96KS9 214 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 CEP170P1Q96L14 293 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 CEP89Q96ST8 783 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 EIF3CQ99613 913 aaKnown RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 DHX33Q9H6R0 707 aaKnown RBP11.18□□□□□ -0.62
SNF8-214ENST00000515174 BCAS3Q9H6U6 928 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 ZFYVE28Q9HCC9 887 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 ZNF302Q9NR11 478 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 NRBP2Q9NSY0 501 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 USP20Q9Y2K6 914 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 CEP290O15078 2479 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 FRMPD3Q5JV73 1810 aa11.18□□□□□ -0.62
SNF8-214ENST00000515174 MYH11P35749 1972 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 KIAA0391O15091 583 aaKnown RBP11.17□□□□□ -0.62
SNF8-214ENST00000515174 GAS2O43903 313 aaKnown RBP11.17□□□□□ -0.62
SNF8-214ENST00000515174 USO1O60763 962 aaKnown RBP11.17□□□□□ -0.62
SNF8-214ENST00000515174 NOL4O94818 638 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 ATP4AP20648 1035 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 UBA1P22314 1058 aaKnown RBP11.17□□□□□ -0.62
SNF8-214ENST00000515174 RFC5P40937 340 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 NPEPPSP55786 919 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 PRKCEQ02156 737 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 DMP1Q13316 513 aaPredicted RBP11.17□□□□□ -0.62
SNF8-214ENST00000515174 TUBB2AQ13885 445 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 KIF22Q14807 665 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 ZNF792Q3KQV3 632 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 CELF3Q5SZQ8 465 aaKnown RBP11.17□□□□□ -0.62
SNF8-214ENST00000515174 FAM160B1Q5W0V3 765 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 SEPT14Q6ZU15 432 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 PLPPR4Q7Z2D5 763 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 MAP4K3Q8IVH8 894 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 FAM186BQ8IYM0 893 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 ANKRD13CQ8N6S4 541 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 VTI1AQ96AJ9 217 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 PCMTD1Q96MG8 357 aaPredicted RBP11.17□□□□□ -0.62
SNF8-214ENST00000515174 CHP1Q99653 195 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 TUBB2BQ9BVA1 445 aa11.17□□□□□ -0.62
SNF8-214ENST00000515174 PORCNQ9H237 461 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms