RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 FANCBQ8NB91 859 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 SCLT1Q96NL6 688 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 HINFPQ9BQA5 517 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 EMILIN2Q9BXX0 1053 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 ADAMTS10Q9H324 1103 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 TBC1D22BQ9NU19 505 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 WNT16Q9UBV4 365 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 TAF6LQ9Y6J9 622 aa11.54□□□□□ -0.56
DDR1-276ENST00000514534 EP300Q09472 2414 aaPredicted RBP11.53□□□□□ -0.56
DDR1-276ENST00000514534 PSAPP07602 524 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 SKIP12755 728 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 DARSP14868 501 aaKnown RBP11.53□□□□□ -0.56
DDR1-276ENST00000514534 GPC3P51654 580 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 CDC42EP1Q00587 391 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
DDR1-276ENST00000514534 LETM2Q2VYF4 491 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 TTC22Q5TAA0 569 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 ELMSAN1Q6PJG2 1045 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 SYNE3Q6ZMZ3 975 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 TRMT1LQ7Z2T5 733 aaKnown RBP11.53□□□□□ -0.56
DDR1-276ENST00000514534 KIAA2013Q8IYS2 634 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 AUTS2Q8WXX7 1259 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 STAMQ92783 540 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 MAP4K1Q92918 833 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 CHST12Q9NRB3 414 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 NRBP2Q9NSY0 501 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 RBM28Q9NW13 759 aaKnown RBP11.53□□□□□ -0.56
DDR1-276ENST00000514534 PCDHA10Q9Y5I2 948 aa11.53□□□□□ -0.56
DDR1-276ENST00000514534 DMDP11532 3685 aa11.52□□□□□ -0.56
DDR1-276ENST00000514534 SMCO2A6NFE2 343 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 DHX15O43143 795 aaKnown RBP11.52□□□□□ -0.57
DDR1-276ENST00000514534 SGSM2O43147 1006 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 IGHDP01880 384 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 CHMLP26374 656 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 KLRC2P26717 231 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 RNASELQ05823 741 aaKnown RBP11.52□□□□□ -0.57
DDR1-276ENST00000514534 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 POTEHQ6S545 545 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 MICU3Q86XE3 530 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 LRRC71Q8N4P6 559 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 LINC01465Q8N7H1 131 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 NXPE3Q969Y0 559 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 ZNF577Q9BSK1 485 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 NRDE2Q9H7Z3 1164 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 GABBR1Q9UBS5 961 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 DPP7Q9UHL4 492 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 SAMM50Q9Y512 469 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 RBM8AQ9Y5S9 174 aaKnown RBP11.52□□□□□ -0.57
DDR1-276ENST00000514534 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 CNTNAP5Q8WYK1 1306 aa11.52□□□□□ -0.57
DDR1-276ENST00000514534 FAM86B1E9PN63 330 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 GALTP07902 379 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 CFHP08603 1231 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 CYP3A4P08684 503 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 FAM86B2P0C5J1 330 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 GSPT1P15170 499 aaKnown RBP11.51□□□□□ -0.57
DDR1-276ENST00000514534 SFPQP23246 707 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDR1-276ENST00000514534 PHKA2P46019 1235 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
DDR1-276ENST00000514534 CLCN4P51793 760 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 TWF2Q6IBS0 349 aaKnown RBP11.51□□□□□ -0.57
DDR1-276ENST00000514534 TYW1BQ6NUM6 668 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 GLB1LQ6UWU2 654 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 CYP26C1Q6V0L0 522 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
DDR1-276ENST00000514534 RAB11FIP4Q86YS3 637 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 CMASQ8NFW8 434 aaPredicted RBP11.51□□□□□ -0.57
DDR1-276ENST00000514534 NLRP7Q8WX94 980 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 RUBCNQ92622 972 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 BORCS6Q96GS4 357 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 KLHL5Q96PQ7 755 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 TRAIPQ9BWF2 469 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 RHOBTB2Q9BYZ6 727 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 GCOM2Q9BZD3 368 aaPredicted RBP11.51□□□□□ -0.57
DDR1-276ENST00000514534 INO80BQ9C086 356 aaPredicted RBP11.51□□□□□ -0.57
DDR1-276ENST00000514534 TBC1D13Q9NVG8 400 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 R4GN57 208 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 CACNA1BQ00975 2339 aa11.51□□□□□ -0.57
DDR1-276ENST00000514534 IGLV3-22A0A075B6J6 115 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 NARSO43776 548 aaKnown RBP11.5□□□□□ -0.57
DDR1-276ENST00000514534 OATP04181 439 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 SRFP11831 508 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 GBP2P32456 591 aaPredicted RBP11.5□□□□□ -0.57
DDR1-276ENST00000514534 RAB27AP51159 221 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 NOMO2Q5JPE7 1267 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 PHLDB3Q6NSJ2 640 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 SGMS1Q86VZ5 419 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 RIN2Q8WYP3 895 aaPredicted RBP11.5□□□□□ -0.57
DDR1-276ENST00000514534 PGBD4Q96DM1 585 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 ZNF668Q96K58 619 aaPredicted RBP11.5□□□□□ -0.57
DDR1-276ENST00000514534 TBC1D17Q9HA65 648 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
DDR1-276ENST00000514534 BARHL2Q9NY43 387 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 DLL3Q9NYJ7 618 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 SSX2IPQ9Y2D8 614 aa11.5□□□□□ -0.57
DDR1-276ENST00000514534 MIA3Q5JRA6 1907 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms