RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 GVINP1Q7Z2Y8 2422 aa23■■□□□ 1.27
SQSTM1-215ENST00000514093 CTSAP10619 480 aa22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 DDX53Q86TM3 631 aaKnown RBP22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 SIX5Q8N196 739 aa22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 DTWD2Q8NBA8 298 aa22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 KCNG4Q8TDN1 519 aa22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 NLRP7Q8WX94 980 aa22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 KCNK12Q9HB15 430 aa22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 RBM28Q9NW13 759 aaKnown RBP22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 MYH9P35579 1960 aaKnown RBP22.99■■□□□ 1.27
SQSTM1-215ENST00000514093 WDR87Q6ZQQ6 2873 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 SPDYE4A6NLX3 237 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 ZNF862O60290 1169 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 CYP3A4P08684 503 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 RTN1Q16799 776 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 CREB3L3Q68CJ9 461 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 APOA5Q6Q788 366 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 CCDC149Q6ZUS6 474 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 GPR149Q86SP6 731 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 TEX2Q8IWB9 1127 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 SMAP1Q8IYB5 467 aaPredicted RBP22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 CRYGNQ8WXF5 182 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 IGSF21Q96ID5 467 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 DACT1Q9NYF0 836 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 BRPF3Q9ULD4 1205 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 IRAK3Q9Y616 596 aa22.98■■□□□ 1.27
SQSTM1-215ENST00000514093 NARSO43776 548 aaKnown RBP22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 DRP2Q13474 957 aa22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 OTOP3Q7RTS5 596 aa22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 FAM167AQ96KS9 214 aa22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 TCEANC2Q96MN5 208 aa22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 VN1R3Q9BXE9 311 aa22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 NRDE2Q9H7Z3 1164 aa22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 DUSP12Q9UNI6 340 aa22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 INPP5FQ9Y2H2 1132 aa22.97■■□□□ 1.27
SQSTM1-215ENST00000514093 MEIS3P2A8K0S8 358 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 STK25O00506 426 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 OATP04181 439 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 SSBP05455 408 aaKnown RBP eCLIP22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 GALTP07902 379 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 PHKA2P46019 1235 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 POLGP54098 1239 aaPredicted RBP22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 GIT2Q14161 759 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 PRR16Q569H4 304 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 RTP3Q9BQQ7 232 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 GBP3Q9H0R5 595 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 GLT8D2Q9H1C3 349 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 SFXN1Q9H9B4 322 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 NRBP2Q9NSY0 501 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 TBC1D13Q9NVG8 400 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 DNAJB4Q9UDY4 337 aa22.96■■□□□ 1.27
SQSTM1-215ENST00000514093 hCG_1984214I3L0E3 225 aa22.95■■□□□ 1.26
SQSTM1-215ENST00000514093 NECTIN1Q15223 517 aa22.95■■□□□ 1.26
SQSTM1-215ENST00000514093 PTPN14Q15678 1187 aa22.95■■□□□ 1.26
SQSTM1-215ENST00000514093 DENND4AQ7Z401 1863 aa22.95■■□□□ 1.26
SQSTM1-215ENST00000514093 ZNF713Q8N859 430 aaPredicted RBP22.95■■□□□ 1.26
SQSTM1-215ENST00000514093 RMDN1Q96DB5 314 aa22.95■■□□□ 1.26
SQSTM1-215ENST00000514093 MED19A0JLT2 244 aaPredicted RBP22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 ZBTB43O43298 467 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 CFHP08603 1231 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 KLRC2P26717 231 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 SLC11A1P49279 550 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 SETQ01105 290 aaPredicted RBP22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 PRKCEQ02156 737 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 RNASELQ05823 741 aaKnown RBP22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 UGCGQ16739 394 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 NOMO2Q5JPE7 1267 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 TWF2Q6IBS0 349 aaKnown RBP22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 PPFIBP1Q86W92 1011 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 ZNF710Q8N1W2 664 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 RSAD2Q8WXG1 361 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 KLHL5Q96PQ7 755 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 R4GN57 208 aa22.94■■□□□ 1.26
SQSTM1-215ENST00000514093 WDR64B1ANS9 1081 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 B4GALT3O60512 393 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 CDC27P30260 824 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 CLCN4P51793 760 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 TBC1D8BQ0IIM8 1120 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 GLB1LQ6UWU2 654 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 ZNF280BQ86YH2 543 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 RIN2Q8WYP3 895 aaPredicted RBP22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 GCOM2Q9BZD3 368 aaPredicted RBP22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 CHST12Q9NRB3 414 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 DISC1Q9NRI5 854 aa22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 FAM217BQ9NTX9 383 aaPredicted RBP22.93■■□□□ 1.26
SQSTM1-215ENST00000514093 ZNF292O60281 2723 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 A0A087WZ62 844 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 GOLGA8AA7E2F4 631 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 GOLGA8BA8MQT2 603 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 CHMP2AO43633 222 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 N4BP1O75113 896 aaKnown RBP22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 OFD1O75665 1012 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 LMNAP02545 664 aaKnown RBP22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 CNPP09543 421 aaKnown RBP22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 MYBP10242 640 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 LETM2Q2VYF4 491 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 KIAA2013Q8IYS2 634 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 SH2D3AQ9BRG2 576 aa22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 FDXACB1Q9BRP7 624 aaPredicted RBP22.92■■□□□ 1.26
SQSTM1-215ENST00000514093 EP300Q09472 2414 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms