RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CCDC34Q96HJ3 373 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 PANK2Q9BZ23 570 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 LRRC27Q9C0I9 530 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 GOLPH3LQ9H4A5 285 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 SUGCTQ9HAC7 445 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 XPNPEP1Q9NQW7 623 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 PDLIM7Q9NR12 457 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 PCDH10Q9P2E7 1040 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 TBX21Q9UL17 535 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 ODF2LQ9ULJ1 636 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 TTC3P53804 2025 aa8.42□□□□□ -1.06
HMGXB3-204ENST00000513318 FNDC1Q4ZHG4 1894 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 M0QZ92 97 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 ACTN4O43707 911 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 GADD45BO75293 160 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 ZNF202O95125 648 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 SLFN14P0C7P3 912 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 GUCY2CP25092 1073 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 CDC42EP1Q00587 391 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 AMPD3Q01432 767 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 DHX8Q14562 1220 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 TRIM71Q2Q1W2 868 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 PROX2Q3B8N5 592 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 RUFY4Q6ZNE9 571 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 C1orf186Q6ZWK4 172 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 GPIHBP1Q8IV16 184 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 C7orf61Q8IZ16 206 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 FMR1NBQ8N0W7 255 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 NME8Q8N427 588 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 LRRC71Q8N4P6 559 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 ENGASEQ8NFI3 743 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 DNAJB3Q8WWF6 145 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 PSPC1Q8WXF1 523 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 DHX38Q92620 1227 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 KIFAP3Q92845 792 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 WNT8BQ93098 351 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 ZBTB10Q96DT7 871 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 DRC1Q96MC2 740 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 NOC4LQ9BVI4 516 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 RUSC1Q9BVN2 902 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 SLC4A5Q9BY07 1137 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 FAM49AQ9H0Q0 323 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 HIPK3Q9H422 1215 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 PRDM5Q9NQX1 630 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 LMBRD1Q9NUN5 540 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 TMEM39AQ9NV64 488 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 KBTBD4Q9NVX7 518 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 PRKAG2Q9UGJ0 569 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 AKT3Q9Y243 479 aa8.41□□□□□ -1.06
HMGXB3-204ENST00000513318 NLRC5Q86WI3 1866 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 KIAA0355O15063 1070 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 ASAP2O43150 1006 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 KINO60870 393 aaKnown RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 HIP1RO75146 1068 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 TBCAO75347 108 aaKnown RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 NR1I2O75469 434 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 PARNO95453 639 aaKnown RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 VTNP04004 478 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 KRT18P05783 430 aaKnown RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 MYL1P05976 194 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 CKBP12277 381 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 SELPP16109 830 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 LIG1P18858 919 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 THPOP40225 353 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 RGS19P49795 217 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 PRSS12P56730 875 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 MRPS6P82932 125 aaKnown RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 DRP2Q13474 957 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 SNW1Q13573 536 aaKnown RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 MXD4Q14582 209 aaPredicted RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 PPP2R5AQ15172 486 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 FAM102BQ5T8I3 360 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 KANK3Q6NY19 840 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 KRBA2Q6ZNG9 492 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 ZNF410Q86VK4 478 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 KIAA0319LQ8IZA0 1049 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 CNNM3Q8NE01 707 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 TMEM143Q96AN5 459 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 TIGD1Q96MW7 591 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 REEP2Q9BRK0 252 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 TRIM9Q9C026 710 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 POLR3FQ9H1D9 316 aaPredicted RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 C17orf75Q9HAS0 396 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 SUCLA2Q9P2R7 463 aaPredicted RBP8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 SERTAD1Q9UHV2 236 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 KCNG1Q9UIX4 513 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 VPS9D1Q9Y2B5 631 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 COL4A3BPQ9Y5P4 624 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 TRPV2Q9Y5S1 764 aa8.4□□□□□ -1.06
HMGXB3-204ENST00000513318 TNRC18O15417 2968 aaPredicted RBP8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 MYMKA6NI61 221 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 TK2O00142 265 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 FAM13AO94988 1023 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 MBD3O95983 291 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 CTSHP09668 335 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 RAG1P15918 1043 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 PTMSP20962 102 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 MCM4P33991 863 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 ARL2P36404 184 aa8.39□□□□□ -1.07
HMGXB3-204ENST00000513318 NAMPTP43490 491 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms