RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 DIS3L2Q8IYB7 885 aaKnown RBP10.28□□□□□ -0.76
YIPF3-216ENST00000512713 EFHBQ8N7U6 833 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 NSUN7Q8NE18 718 aaKnown RBP10.28□□□□□ -0.76
YIPF3-216ENST00000512713 TCP11Q8WWU5 503 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 PRPF31Q8WWY3 499 aaKnown RBP10.28□□□□□ -0.76
YIPF3-216ENST00000512713 PSPC1Q8WXF1 523 aaKnown RBP10.28□□□□□ -0.76
YIPF3-216ENST00000512713 ZNF558Q96NG5 402 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 CASD1Q96PB1 797 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 CEP89Q96ST8 783 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 POP1Q99575 1024 aaKnown RBP10.28□□□□□ -0.76
YIPF3-216ENST00000512713 LXNQ9BS40 222 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 MRPL9Q9BYD2 267 aaKnown RBP10.28□□□□□ -0.76
YIPF3-216ENST00000512713 SPG21Q9NZD8 308 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 CD207Q9UJ71 328 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 LIMCH1Q9UPQ0 1083 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 PIN4Q9Y237 131 aaKnown RBP10.28□□□□□ -0.76
YIPF3-216ENST00000512713 LZTS1Q9Y250 596 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 NCOR1O75376 2440 aa10.28□□□□□ -0.76
YIPF3-216ENST00000512713 TRIP12Q14669 1992 aaPredicted RBP10.28□□□□□ -0.76
YIPF3-216ENST00000512713 CARNS1A5YM72 827 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 BTBD18B2RXH4 712 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 ASAP2O43150 1006 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 NEMFO60524 1076 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 SRGAP2CP0DJJ0 459 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 COL9A1P20849 921 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.77
YIPF3-216ENST00000512713 IRS1P35568 1242 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 LTBRP36941 435 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 RAB27AP51159 221 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 PLCB3Q01970 1234 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 CYP4A11Q02928 519 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 BMS1Q14692 1282 aaKnown RBP10.27□□□□□ -0.77
YIPF3-216ENST00000512713 XKR9Q5GH70 373 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 TMEM31Q5JXX7 168 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 KCNT2Q6UVM3 1135 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 GLB1LQ6UWU2 654 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 ADHFE1Q8IWW8 467 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 TNFRSF25Q93038 417 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 PGBD4Q96DM1 585 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 CCDC43Q96MW1 224 aaKnown RBP10.27□□□□□ -0.77
YIPF3-216ENST00000512713 CDCA3Q99618 268 aaPredicted RBP10.27□□□□□ -0.77
YIPF3-216ENST00000512713 EPHX3Q9H6B9 360 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 CWH43Q9H720 699 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 NGRNQ9NPE2 291 aaKnown RBP10.27□□□□□ -0.77
YIPF3-216ENST00000512713 RGL1Q9NZL6 768 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 COL4A3BPQ9Y5P4 624 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 MYH7BA7E2Y1 1941 aa10.27□□□□□ -0.77
YIPF3-216ENST00000512713 FAM205CA6NFA0 338 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 PI4K2BG5E9Z4 385 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 LINC01565O15544 149 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 JAK2O60674 1132 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 LARGE1O95461 756 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 SEC24BO95487 1268 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 TXKP42681 527 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 PHKA2P46019 1235 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 FOSBP53539 338 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 RNASELQ05823 741 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 ZP2Q05996 745 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 DLX2Q07687 328 aaPredicted RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 SPIRE1Q08AE8 756 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 LAMTOR4Q0VGL1 99 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 SMAD4Q13485 552 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 CTTNQ14247 550 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 MXD4Q14582 209 aaPredicted RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 SMAD2Q15796 467 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 EARS2Q5JPH6 523 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 CLLU1OSQ5K130 101 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 LRRC55Q6ZSA7 311 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 TMC7Q7Z402 723 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 SRGAP1Q7Z6B7 1085 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 ADGRD2Q7Z7M1 963 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 ZNF598Q86UK7 904 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 KSR1Q8IVT5 923 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 HELQQ8TDG4 1101 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 MRPS27Q92552 414 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 TMEM143Q96AN5 459 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 DYDC2Q96IM9 177 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 TCF25Q9BQ70 676 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 EIF2AK1Q9BQI3 630 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 LLPHQ9BRT6 129 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 DHX33Q9H6R0 707 aaKnown RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 TTC12Q9H892 705 aaPredicted RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 CD320Q9NPF0 282 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 ENTPD7Q9NQZ7 604 aa10.26□□□□□ -0.77
YIPF3-216ENST00000512713 WRAP73Q9P2S5 460 aaPredicted RBP10.26□□□□□ -0.77
YIPF3-216ENST00000512713 PER2O15055 1255 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 ZNF623O75123 536 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 TBX10O75333 385 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 SLITRK3O94933 977 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 RBM25P49756 843 aaKnown RBP10.25□□□□□ -0.77
YIPF3-216ENST00000512713 ERVFC1P60507 584 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 COASYQ13057 564 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 GNL2Q13823 731 aaKnown RBP10.25□□□□□ -0.77
YIPF3-216ENST00000512713 TFDP1Q14186 410 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 EMC2Q15006 297 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 PCBP1Q15365 356 aaKnown RBP eCLIP10.25□□□□□ -0.77
YIPF3-216ENST00000512713 TMEM87AQ8NBN3 555 aa10.25□□□□□ -0.77
YIPF3-216ENST00000512713 RNF149Q8NC42 400 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms