RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CKBP12277 381 aa9.51□□□□□ -0.89
VCAN-208ENST00000512590 MYL5Q02045 173 aa9.51□□□□□ -0.89
VCAN-208ENST00000512590 MUM1Q2TAK8 710 aa9.51□□□□□ -0.89
VCAN-208ENST00000512590 ASPRV1Q53RT3 343 aa9.51□□□□□ -0.89
VCAN-208ENST00000512590 VN1R5Q7Z5H4 357 aa9.51□□□□□ -0.89
VCAN-208ENST00000512590 ZNF274Q96GC6 653 aaPredicted RBP9.51□□□□□ -0.89
VCAN-208ENST00000512590 PRKD2Q9BZL6 878 aa9.51□□□□□ -0.89
VCAN-208ENST00000512590 KRCC1Q9NPI7 259 aaPredicted RBP9.51□□□□□ -0.89
VCAN-208ENST00000512590 ZNF302Q9NR11 478 aa9.51□□□□□ -0.89
VCAN-208ENST00000512590 FAM207AQ9NSI2 230 aaPredicted RBP9.51□□□□□ -0.89
VCAN-208ENST00000512590 TTC41PQ6P2S7 1318 aa9.51□□□□□ -0.89
VCAN-208ENST00000512590 BBS9Q3SYG4 887 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 TYW1BQ6NUM6 668 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 OSCP1Q8WVF1 389 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 SLC4A9Q96Q91 983 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 COQ6Q9Y2Z9 468 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 CCDC78A2IDD5 438 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 MSH2P43246 934 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 HARS2P49590 506 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 CFAP221Q4G0U5 840 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 TMTC3Q6ZXV5 915 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 DIS3L2Q8IYB7 885 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 C12orf50Q8NA57 414 aaPredicted RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 LRRC8CQ8TDW0 803 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 TFB1MQ8WVM0 346 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 JADE3Q92613 823 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 MYL10Q9BUA6 226 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 MOV10L1Q9BXT6 1211 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 ZWILCHQ9H900 591 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 RAVER2Q9HCJ3 691 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 PCDHB6Q9Y5E3 794 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 SYCE1LA8MT33 242 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 NCAM2O15394 837 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 SRGAP2O75044 1071 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 SUPT3HO75486 399 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 RGS2P41220 211 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 NDUFV1P49821 464 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 UPF3AQ9H1J1 476 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 MRPL47Q9HD33 250 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 MKL2Q9ULH7 1088 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 HEMK1Q9Y5R4 338 aaPredicted RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 TRIM64A6NGJ6 449 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 NUDT14O95848 222 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 GRK3P35626 688 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 JAK3P52333 1124 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 LVRNQ6Q4G3 990 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 ZSCAN10Q96SZ4 725 aaPredicted RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 C2orf40Q9H1Z8 148 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 BLZF1Q9H2G9 400 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 OSGEPL1Q9H4B0 414 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 RRAGCQ9HB90 399 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 TAB2Q9NYJ8 693 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 GTSE1Q9NYZ3 720 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 FLT4P35916 1363 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 VPS4BO75351 444 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 ITGA4P13612 1032 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 SDSP20132 328 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 KLRC2P26717 231 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 SLC16A1P53985 500 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 EFHC2Q5JST6 749 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 BLIDQ8IZY5 108 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 PNMA1Q8ND90 353 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 ZMAT2Q96NC0 199 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 NAPGQ99747 312 aaPredicted RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 EPN3Q9H201 632 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 CAAP1Q9H8G2 361 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 INTS10Q9NVR2 710 aaKnown RBP9.5□□□□□ -0.89
VCAN-208ENST00000512590 SOHLH2Q9NX45 425 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 STK38LQ9Y2H1 464 aa9.5□□□□□ -0.89
VCAN-208ENST00000512590 POTEB3A0JP26 581 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CPT1AP50416 773 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ATP8B2P98198 1209 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ADAM9Q13443 819 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CDH18Q13634 790 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CBFBQ13951 182 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ZNF544Q6NX49 715 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 POTEBQ6S5H4 581 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ZNF713Q8N859 430 aaPredicted RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 MCOLN3Q8TDD5 553 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 STAMQ92783 540 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 DEPDC7Q96QD5 511 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 PSMB7Q99436 277 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 SLC52A2Q9HAB3 445 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ALKBH4Q9NXW9 302 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 KLHL14Q9P2G3 628 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ZNF711Q9Y462 761 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 TRPM2O94759 1503 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 KANSL1LA0AUZ9 987 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 RASGRP1O95267 797 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CAPN2P17655 700 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 GPSM2P81274 684 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 MAP3K10Q02779 954 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 TRIP4Q15650 581 aaPredicted RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 PLA2G4CQ9UP65 541 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 FAM32AQ9Y421 112 aaKnown RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 NSD2O96028 1365 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 GOLGA8JA6NMD2 632 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms