RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 NXPE3Q969Y0 559 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 TMEM87BQ96K49 555 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 FAM167AQ96KS9 214 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 CNTNAP3BQ96NU0 1288 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 CNTNAP3Q9BZ76 1288 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 GLT8D2Q9H1C3 349 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 NRBP2Q9NSY0 501 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 TBC1D22BQ9NU19 505 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 DPP7Q9UHL4 492 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 CA14Q9ULX7 337 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 SIT1Q9Y3P8 196 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 SAMM50Q9Y512 469 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 SLC12A7Q9Y666 1083 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 TAF6LQ9Y6J9 622 aa14.23□□□□□ -0.13
DDX41-215ENST00000512431 KRBA1A5PL33 1030 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 IPO5O00410 1097 aaKnown RBP14.22□□□□□ -0.13
DDX41-215ENST00000512431 KRT37O76014 449 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 GALTP07902 379 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 DARSP14868 501 aaKnown RBP14.22□□□□□ -0.13
DDX41-215ENST00000512431 SREBF1P36956 1147 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 CLCN4P51793 760 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 AP3B2Q13367 1082 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 ZNF746Q6NUN9 644 aaPredicted RBP14.22□□□□□ -0.13
DDX41-215ENST00000512431 PPP1R18Q6NYC8 613 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 SYNE3Q6ZMZ3 975 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 C1orf210Q8IVY1 113 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 LRRC71Q8N4P6 559 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 FANCBQ8NB91 859 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 ZNF668Q96K58 619 aaPredicted RBP14.22□□□□□ -0.13
DDX41-215ENST00000512431 KLHL5Q96PQ7 755 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 ZNF577Q9BSK1 485 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 TBC1D17Q9HA65 648 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 CHST12Q9NRB3 414 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 GABBR1Q9UBS5 961 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 PCDHA10Q9Y5I2 948 aa14.22□□□□□ -0.13
DDX41-215ENST00000512431 SMCO2A6NFE2 343 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 SH2B2O14492 632 aaPredicted RBP14.21□□□□□ -0.13
DDX41-215ENST00000512431 DHX15O43143 795 aaKnown RBP14.21□□□□□ -0.13
DDX41-215ENST00000512431 KINO60870 393 aaKnown RBP14.21□□□□□ -0.13
DDX41-215ENST00000512431 DCNP07585 359 aaKnown RBP14.21□□□□□ -0.13
DDX41-215ENST00000512431 SP9P0CG40 484 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 SRFP11831 508 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 FGFR4P22455 802 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 LIFRP42702 1097 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 PHKA2P46019 1235 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 GPC3P51654 580 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 CDC42EP1Q00587 391 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 PTPN14Q15678 1187 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 RSPO4Q2I0M5 234 aaPredicted RBP14.21□□□□□ -0.13
DDX41-215ENST00000512431 NOMO2Q5JPE7 1267 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 WWC2Q6AWC2 1192 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 PHLDB3Q6NSJ2 640 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 CYP26C1Q6V0L0 522 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 TMTC3Q6ZXV5 915 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 TMEM173Q86WV6 379 aaPredicted RBP14.21□□□□□ -0.13
DDX41-215ENST00000512431 SLC44A3Q8N4M1 653 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 DCLK2Q8N568 766 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 RSAD2Q8WXG1 361 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 BORCS6Q96GS4 357 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 GCOM2Q9BZD3 368 aaPredicted RBP14.21□□□□□ -0.13
DDX41-215ENST00000512431 GBP3Q9H0R5 595 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 NRDE2Q9H7Z3 1164 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 MRPL17Q9NRX2 175 aaKnown RBP14.21□□□□□ -0.13
DDX41-215ENST00000512431 INPP5FQ9Y2H2 1132 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 DMXL1Q9Y485 3027 aa14.21□□□□□ -0.13
DDX41-215ENST00000512431 CCDC195A0A1B0GUA6 201 aa14.2□□□□□ -0.14
DDX41-215ENST00000512431 SSBP05455 408 aaKnown RBP eCLIP14.2□□□□□ -0.14
DDX41-215ENST00000512431 CNPP09543 421 aaKnown RBP14.2□□□□□ -0.14
DDX41-215ENST00000512431 TWF2Q6IBS0 349 aaKnown RBP14.2□□□□□ -0.14
DDX41-215ENST00000512431 RAB11FIP4Q86YS3 637 aa14.2□□□□□ -0.14
DDX41-215ENST00000512431 GPR161Q8N6U8 529 aaKnown RBP14.2□□□□□ -0.14
DDX41-215ENST00000512431 CMASQ8NFW8 434 aaPredicted RBP14.2□□□□□ -0.14
DDX41-215ENST00000512431 FEZF2Q8TBJ5 459 aa14.2□□□□□ -0.14
DDX41-215ENST00000512431 URGCPQ8TCY9 931 aa14.2□□□□□ -0.14
DDX41-215ENST00000512431 FAM193BQ96PV7 902 aaPredicted RBP14.2□□□□□ -0.14
DDX41-215ENST00000512431 INO80BQ9C086 356 aaPredicted RBP14.2□□□□□ -0.14
DDX41-215ENST00000512431 WDR6Q9NNW5 1121 aaKnown RBP14.2□□□□□ -0.14
DDX41-215ENST00000512431 TBC1D13Q9NVG8 400 aa14.2□□□□□ -0.14
DDX41-215ENST00000512431 NCDNQ9UBB6 729 aa14.2□□□□□ -0.14
DDX41-215ENST00000512431 SSX2IPQ9Y2D8 614 aa14.2□□□□□ -0.14
DDX41-215ENST00000512431 EVPLQ92817 2033 aa14.2□□□□□ -0.14
DDX41-215ENST00000512431 GVINP1Q7Z2Y8 2422 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 FAM86B1E9PN63 330 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 hCG_1984214I3L0E3 225 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 ALDH2P05091 517 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 FAM86B2P0C5J1 330 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 SFPQP23246 707 aaKnown RBP eCLIP14.19□□□□□ -0.14
DDX41-215ENST00000512431 SETQ01105 290 aaPredicted RBP14.19□□□□□ -0.14
DDX41-215ENST00000512431 LONRF3Q496Y0 759 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 LINC01465Q8N7H1 131 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 ZNF713Q8N859 430 aaPredicted RBP14.19□□□□□ -0.14
DDX41-215ENST00000512431 GPR152Q8TDT2 470 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 MAP4K1Q92918 833 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 LPPQ93052 612 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 SECISBP2LQ93073 1101 aaKnown RBP14.19□□□□□ -0.14
DDX41-215ENST00000512431 PGBD4Q96DM1 585 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 TRAIPQ9BWF2 469 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 MAN1C1Q9NR34 630 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 ARHGEF3Q9NR81 526 aa14.19□□□□□ -0.14
DDX41-215ENST00000512431 EPS15L1Q9UBC2 864 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms