RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 LONRF3Q496Y0 759 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 DDX53Q86TM3 631 aaKnown RBP21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 CABP7Q86V35 215 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 MICU3Q86XE3 530 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 KIAA2013Q8IYS2 634 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 RUFY2Q8WXA3 655 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 RSAD2Q8WXG1 361 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 LPPQ93052 612 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 IGSF21Q96ID5 467 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 TMEM87BQ96K49 555 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 RTP3Q9BQQ7 232 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 CALM1P0DP23 149 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 CALM2P0DP24 149 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 CALM3P0DP25 149 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 MCM5P33992 734 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 PTPN14Q15678 1187 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 TMTC2Q8N394 836 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 NRDE2Q9H7Z3 1164 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 GABBR1Q9UBS5 961 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 DNAJB4Q9UDY4 337 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 FBXL21Q9UKT6 434 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 SLC12A7Q9Y666 1083 aa21.56■■□□□ 1.04
HMGCS1-206ENST00000511774 LMNAP02545 664 aaKnown RBP21.55■■□□□ 1.04
HMGCS1-206ENST00000511774 ZNF76P36508 570 aa21.55■■□□□ 1.04
HMGCS1-206ENST00000511774 DRP2Q13474 957 aa21.55■■□□□ 1.04
HMGCS1-206ENST00000511774 CCDC149Q6ZUS6 474 aa21.55■■□□□ 1.04
HMGCS1-206ENST00000511774 OTOP3Q7RTS5 596 aa21.55■■□□□ 1.04
HMGCS1-206ENST00000511774 KCNG4Q8TDN1 519 aa21.55■■□□□ 1.04
HMGCS1-206ENST00000511774 RIN2Q8WYP3 895 aaPredicted RBP21.55■■□□□ 1.04
HMGCS1-206ENST00000511774 ACSF2Q96CM8 615 aaPredicted RBP21.55■■□□□ 1.04
HMGCS1-206ENST00000511774 SMCO2A6NFE2 343 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 MAGEB2O15479 319 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 GALTP07902 379 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 CFHP08603 1231 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 CLCN4P51793 760 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 POLGP54098 1239 aaPredicted RBP21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 JAKMIP3Q5VZ66 844 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 ZNF746Q6NUN9 644 aaPredicted RBP21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 PPP1R18Q6NYC8 613 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 DGLUCYQ7Z3D6 616 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 EXOC6Q8TAG9 804 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 MAP7D2Q96T17 732 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 MRPL9Q9BYD2 267 aaKnown RBP21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 SFXN1Q9H9B4 322 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 TBC1D13Q9NVG8 400 aa21.54■■□□□ 1.04
HMGCS1-206ENST00000511774 SLC11A1P49279 550 aa21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 AP3B2Q13367 1082 aa21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 AAMPQ13685 434 aa21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 UGCGQ16739 394 aa21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 DCLK2Q8N568 766 aa21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 KLHL5Q96PQ7 755 aa21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 ZNF577Q9BSK1 485 aa21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 V9GY48 417 aaPredicted RBP21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 DOCK6Q96HP0 2047 aa21.53■■□□□ 1.04
HMGCS1-206ENST00000511774 LILRB3O75022 631 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 KRT37O76014 449 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 CYP3A4P08684 503 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 CNPP09543 421 aaKnown RBP21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 PHKA2P46019 1235 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 LETM2Q2VYF4 491 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 SGMS1Q86VZ5 419 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 ZNF280BQ86YH2 543 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 BARHL2Q9NY43 387 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 PCDHA10Q9Y5I2 948 aa21.52■■□□□ 1.04
HMGCS1-206ENST00000511774 COL4A3Q01955 1670 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 SLC27A2O14975 620 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 SSBP05455 408 aaKnown RBP eCLIP21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 PSAPP07602 524 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 AFF1P51825 1210 aaKnown RBP21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 BMS1Q14692 1282 aaKnown RBP21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 APOA5Q6Q788 366 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 TMEM87AQ8NBN3 555 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 LSG1Q9H089 658 aaKnown RBP21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 GBP3Q9H0R5 595 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 DLGAP2Q9P1A6 1054 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 CA14Q9ULX7 337 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 CEP131Q9UPN4 1083 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 INPP5FQ9Y2H2 1132 aa21.51■■□□□ 1.03
HMGCS1-206ENST00000511774 EDIL3O43854 480 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 OFD1O75665 1012 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 OATP04181 439 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 PRKCEQ02156 737 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 GIT2Q14161 759 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 NOMO2Q5JPE7 1267 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 SMAP1Q8IYB5 467 aaPredicted RBP21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 NLRP7Q8WX94 980 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 LENG9Q96B70 501 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 MYADMQ96S97 322 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 TBC1D17Q9HA65 648 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 FAM217BQ9NTX9 383 aaPredicted RBP21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 TBC1D22BQ9NU19 505 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 DACT1Q9NYF0 836 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 IGSF9Q9P2J2 1179 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 WNT16Q9UBV4 365 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 BRPF3Q9ULD4 1205 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 CHD8Q9HCK8 2581 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 ZFHX4Q86UP3 3567 aa21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 MAP1BP46821 2468 aaKnown RBP21.5■■□□□ 1.03
HMGCS1-206ENST00000511774 DDHD2O94830 711 aa21.49■■□□□ 1.03
HMGCS1-206ENST00000511774 DCNP07585 359 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms