RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 APOA5Q6Q788 366 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 B3GNT6Q6ZMB0 384 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 KBTBD2Q8IY47 623 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 SLC7A5P1Q8MH63 180 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 ZNF713Q8N859 430 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-208ENST00000511604 CCDC42Q96M95 316 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 LBHD1Q9BQE6 289 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-208ENST00000511604 MAK16Q9BXY0 300 aaKnown RBP7.87□□□□□ -1.15
CPNE4-208ENST00000511604 TTYH3Q9C0H2 523 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 GOLPH3Q9H4A6 298 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 ARHGAP20Q9P2F6 1191 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 KLHL14Q9P2G3 628 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 CTDP1Q9Y5B0 961 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-208ENST00000511604 PCDHA13Q9Y5I0 950 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 BCL9LQ86UU0 1499 aa7.87□□□□□ -1.15
CPNE4-208ENST00000511604 CCDC162PA2VCL2 907 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 BTBD11A6QL63 1104 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 B4E1Z4 1266 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 CAPN9O14815 690 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 RNF113AO15541 343 aaKnown RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 MGEA5O60502 916 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 TARSP26639 723 aaKnown RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 TMED10P49755 219 aaKnown RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 CCR3P51677 355 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 NEK3P51956 506 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 FKBP4Q02790 459 aaKnown RBP eCLIP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 SCARF1Q14162 830 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 CNGA2Q16280 664 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 TMEM214Q6NUQ4 689 aaKnown RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 CCDC174Q6PII3 467 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 Q6ZNX1 250 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 ZBED8Q8IZ13 594 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 NUP93Q8N1F7 819 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 FBXL16Q8N461 479 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 CEP70Q8NHQ1 597 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 LPIN2Q92539 896 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 DGCR14Q96DF8 476 aaKnown RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 INPP4AQ96PE3 977 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 MYD88Q99836 296 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 NDEL1Q9GZM8 345 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 GBA3Q9H227 469 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 EPB41L1Q9H4G0 881 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 TRPC7Q9HCX4 862 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 DDX18Q9NVP1 670 aaKnown RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 NDUFA13Q9P0J0 144 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 HAO1Q9UJM8 370 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 STK36Q9NRP7 1315 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 PLEKHG1Q9ULL1 1385 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 LGALS16A8MUM7 142 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 ATP5J2-PTCD1G3V325 749 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 PTCD1O75127 700 aaKnown RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 TBX10O75333 385 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 OR6B1O95007 311 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 GTF2H1P32780 548 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 RXRGP48443 463 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 PTK7Q13308 1070 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 PDIA6Q15084 440 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 DEPDC1Q5TB30 811 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 KRT27Q7Z3Y8 459 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 PATL1Q86TB9 770 aaKnown RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 SATL1Q86VE3 508 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 BPHLQ86WA6 291 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 VSIG1Q86XK7 387 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 ECHDC2Q86YB7 292 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.86□□□□□ -1.15
CPNE4-208ENST00000511604 ZKSCAN3Q9BRR0 538 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 STK33Q9BYT3 514 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 SLC7A5P2Q9GIP4 190 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 KRT82Q9NSB4 513 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 AKAP12Q02952 1782 aa7.86□□□□□ -1.15
CPNE4-208ENST00000511604 MYO5AQ9Y4I1 1855 aaKnown RBP7.85□□□□□ -1.15
CPNE4-208ENST00000511604 UTYO14607 1347 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 FAM170AA1A519 330 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 NEURL1BA8MQ27 555 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 BHMG1C9JSJ3 638 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-208ENST00000511604 E9PBE3 544 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 CBFA2T3O75081 653 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 MMP1P03956 469 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 CPA3P15088 417 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 GRIA2P42262 883 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 IFI35P80217 286 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-208ENST00000511604 FXNQ16595 210 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 VWA3BQ502W6 1294 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 LRRC24Q50LG9 513 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 C4orf50Q6ZRC1 276 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 UNC13DQ70J99 1090 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 INTS8Q75QN2 995 aaKnown RBP7.85□□□□□ -1.15
CPNE4-208ENST00000511604 OTUD6AQ7L8S5 288 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 BBS5Q8N3I7 341 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 USP38Q8NB14 1042 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 SLC7A6OSQ96CW6 309 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-208ENST00000511604 GSDMAQ96QA5 445 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 MYLK2Q9H1R3 596 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 TMEM59LQ9UK28 342 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 CCPG1Q9ULG6 757 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 HBS1LQ9Y450 684 aaKnown RBP7.85□□□□□ -1.15
CPNE4-208ENST00000511604 TRIM17Q9Y577 477 aa7.85□□□□□ -1.15
CPNE4-208ENST00000511604 GPC6Q9Y625 555 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-208ENST00000511604 TLDC2A0PJX2 215 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms