RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RDH13Q8NBN7 331 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 LRRC45Q96CN5 670 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 STRA6Q9BX79 667 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 TMEM206Q9H813 350 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 VEZTQ9HBM0 779 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 SEPT11Q9NVA2 429 aaKnown RBP19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 RBBP6Q7Z6E9 1792 aaKnown RBP19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 C21orf2O43822 256 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 TBC1D12O60347 775 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 PPP1R37O75864 691 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 BCRP11274 1271 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 PLS1Q14651 629 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 ARHGAP44Q17R89 818 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 BCAS4Q8TDM0 211 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 HOOK2Q96ED9 719 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 GPR88Q9GZN0 384 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 DDX47Q9H0S4 455 aaKnown RBP19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 OSGEPQ9NPF4 335 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 FBXO28Q9NVF7 368 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 DIS3Q9Y2L1 958 aaKnown RBP19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 GOLGA6L10A6NI86 522 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 BUB1BO60566 1050 aaPredicted RBP19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 P4HBP07237 508 aaKnown RBP19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 ABCB4P21439 1286 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 MAPK7Q13164 816 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 SKIDA1Q1XH10 827 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 SPDYE2Q495Y8 402 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 INTS8Q75QN2 995 aaKnown RBP19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 C1orf131Q8NDD1 294 aaKnown RBP19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 DEFB129Q9H1M3 183 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 CCPG1Q9ULG6 757 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 CNTNAP1P78357 1384 aa19.46■□□□□ 0.71
CCHCR1-228ENST00000509552 TRIM66O15016 1216 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 RAD17O75943 681 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 HSD17B4P51659 736 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 DAW1Q8N136 415 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 SH2D3CQ8N5H7 860 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 OLIG1Q8TAK6 271 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 VTI1AQ96AJ9 217 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 SYT11Q9BT88 431 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 PLAAQ9Y263 795 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 GRIN2DO15399 1336 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 LOXHD1Q8IVV2 1947 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 MAPTP10636 758 aaKnown RBP19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 ITGB5P18084 799 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 CAP2P40123 477 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 LRIG3Q6UXM1 1119 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 KDM7AQ6ZMT4 941 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 MIGA2Q7L4E1 593 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 MAEAQ7L5Y9 396 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 FAM107BQ9H098 131 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 KCNH7Q9NS40 1196 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 PKD2L1Q9P0L9 805 aa19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 TTC7AQ9ULT0 858 aaPredicted RBP19.45■□□□□ 0.7
CCHCR1-228ENST00000509552 MYH11P35749 1972 aa19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 ANKRD62A6NC57 917 aa19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 HMGB1P1B2RPK0 211 aaPredicted RBP19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 ICAM1P05362 532 aa19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 KIF22Q14807 665 aa19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 PHLDB3Q6NSJ2 640 aa19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 ATP6V1G3Q96LB4 118 aa19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 ACCSQ96QU6 501 aa19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 NAP1L3Q99457 506 aaPredicted RBP19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 AMACRQ9UHK6 382 aa19.44■□□□□ 0.7
CCHCR1-228ENST00000509552 EBAG9O00559 213 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 ECHS1P30084 290 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 CCT5P48643 541 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 PPATQ06203 517 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 GRIPAP1Q4V328 841 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 CEP85LQ5SZL2 805 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 FKBP1CQ5VVH2 108 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 TTC19Q6DKK2 380 aaPredicted RBP19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 NIPA1Q7RTP0 329 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 AGBL1Q96MI9 1066 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 TMEM39BQ9GZU3 492 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 SAMM50Q9Y512 469 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 BHMG1C9JSJ3 638 aaPredicted RBP19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 FOXN3O00409 490 aaPredicted RBP19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 P4HA2O15460 535 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 LRRN2O75325 713 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 FGGP02679 453 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 ITGA4P13612 1032 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 PTGER2P43116 358 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 ATP1A2P50993 1020 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 MCF2L2Q86YR7 1114 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 AGPAT1Q99943 283 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 PCIF1Q9H4Z3 704 aa19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 DBR1Q9UK59 544 aaKnown RBP19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 UTP11Q9Y3A2 253 aaKnown RBP19.43■□□□□ 0.7
CCHCR1-228ENST00000509552 EMSYQ7Z589 1322 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 ASNSP08243 561 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 NR1D1P20393 614 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 HSD17B3P37058 310 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 VAMP7P51809 220 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 PDCLQ13371 301 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 MTMR3Q13615 1198 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 CLUL1Q15846 466 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 PPP2R5EQ16537 467 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 DDX42Q86XP3 938 aaKnown RBP eCLIP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms