RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 SLC35G2Q8TBE7 412 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 DDX47Q9H0S4 455 aaKnown RBP10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 PARP2Q9UGN5 583 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 SAMM50Q9Y512 469 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 SPDYE3A6NKU9 549 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 ASAP2O43150 1006 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 DAPK3O43293 454 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 ITGA4P13612 1032 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 CHRNA3P32297 505 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 MMP13P45452 471 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 CACNB1Q02641 598 aaPredicted RBP10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 GHRHRQ02643 423 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 ARID5AQ03989 594 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 HLTFQ14527 1009 aaKnown RBP eCLIP10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 ZDHHC24Q6UX98 284 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 DAAM2Q86T65 1068 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 PSMD1Q99460 953 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 PABPC3Q9H361 631 aaKnown RBP10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 PARVGQ9HBI0 331 aa10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 DDX20Q9UHI6 824 aaKnown RBP10.01□□□□□ -0.81
PDGFRA-208ENST00000509490 GOLGA6L10A0A0M3HER8 536 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 PODXLO00592 558 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 KIAA0391O15091 583 aaKnown RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 TTI1O43156 1089 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 PHF2O75151 1096 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 DNAJC8O75937 253 aaPredicted RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 SLITRK3O94933 977 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 GSTA1P08263 222 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 DRD4P21917 467 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 CDR1P51861 262 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 EIF6P56537 245 aaKnown RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 MAPK7Q13164 816 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 ITIH4Q14624 930 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 DRAP1Q14919 205 aaPredicted RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 PODNQ7Z5L7 613 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 CCDC50Q8IVM0 306 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 U2AF1L4Q8WU68 220 aaKnown RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 CTNNBL1Q8WYA6 563 aaPredicted RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 CD101Q93033 1021 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 FMO2Q99518 471 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 INTS2Q9H0H0 1204 aaKnown RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 BHMT2Q9H2M3 363 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 AGPAT3Q9NRZ7 376 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 AMACRQ9UHK6 382 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 DNAJC12Q9UKB3 198 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 ANKRD65E5RJM6 399 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 F5H6K3 240 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 EML1O00423 815 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 ENTPD3O75355 529 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 GCNT3O95395 438 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 GZMAP12544 262 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 FLT3P36888 993 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 CRKP46108 304 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 LMNB2Q03252 620 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 XRCC4Q13426 336 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 CTTNQ14247 550 aaKnown RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 CERKLQ49MI3 558 aaPredicted RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 MFSD5Q6N075 450 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 RAPGEF5Q92565 580 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 ZNF317Q96PQ6 595 aaPredicted RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 AP1M1Q9BXS5 423 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 WDR11Q9BZH6 1224 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 CNOT8Q9UFF9 292 aaKnown RBP10□□□□□ -0.81
PDGFRA-208ENST00000509490 FAM198AQ9UFP1 575 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
PDGFRA-208ENST00000509490 RSPH10B2B2RC85 870 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 RSPH10BP0C881 870 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 TTC19Q6DKK2 380 aaPredicted RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 CYFIP1Q7L576 1253 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 SH3BP5LQ7L8J4 393 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 NACC1Q96RE7 527 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 GRHL1Q9NZI5 618 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 RASAL2Q9UJF2 1139 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 CAPN7Q9Y6W3 813 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 CCDC169A6NNP5 214 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 C6orf229H3BNL8 230 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 FAM13AO94988 1023 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 LYPLA2O95372 231 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 NDUFB10O96000 172 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 AGTP01019 485 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 FGGP02679 453 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 BCRP11274 1271 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 NPR1P16066 1061 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ERCC3P19447 782 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 PEX5P50542 639 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 PRELPP51888 382 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 SEC24CP53992 1094 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 SETQ01105 290 aaPredicted RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 DR1Q01658 176 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 EPC2Q52LR7 807 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 ANKRD20A8PQ5CZ79 823 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 DCAF17Q5H9S7 520 aaPredicted RBP9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 KIAA1755Q5JYT7 1200 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 HS2ST1Q7LGA3 356 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 NIPA1Q7RTP0 329 aa9.99□□□□□ -0.81
PDGFRA-208ENST00000509490 PIGWQ7Z7B1 504 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms