RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.53■□□□□ 0.4
COMMD8-202ENST00000509220 A0A0U1RQF3 1178 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 DGAT1O75907 488 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 EOMESO95936 686 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 SPATA31C1P0DKV0 1188 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 GJB2P29033 226 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 TECP42680 631 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 PAN2Q504Q3 1202 aaKnown RBP17.52■□□□□ 0.4
COMMD8-202ENST00000509220 TIGD5Q53EQ6 642 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 SRGAP1Q7Z6B7 1085 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 KSR1Q8IVT5 923 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 ERMNQ8TAM6 284 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 TMEM143Q96AN5 459 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 NLRP4Q96MN2 994 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 MTRQ99707 1265 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 POLR3CQ9BUI4 534 aaPredicted RBP17.52■□□□□ 0.4
COMMD8-202ENST00000509220 COL25A1Q9BXS0 654 aaPredicted RBP17.52■□□□□ 0.4
COMMD8-202ENST00000509220 BACH2Q9BYV9 841 aa17.52■□□□□ 0.4
COMMD8-202ENST00000509220 TBKBP1A7MCY6 615 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 CSDE1O75534 798 aaKnown RBP17.51■□□□□ 0.39
COMMD8-202ENST00000509220 MUTP22033 750 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 FGFR4P22455 802 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 RARRES1P49788 294 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 GATMP50440 423 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 TOB1P50616 345 aaPredicted RBP17.51■□□□□ 0.39
COMMD8-202ENST00000509220 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
COMMD8-202ENST00000509220 LAMTOR4Q0VGL1 99 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 MXD4Q14582 209 aaPredicted RBP17.51■□□□□ 0.39
COMMD8-202ENST00000509220 FAM102BQ5T8I3 360 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 CATSPER3Q86XQ3 398 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 ECHDC2Q86YB7 292 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 C4orf32Q8N8J7 132 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 HLA-CQ95604 372 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 CCDC43Q96MW1 224 aaKnown RBP17.51■□□□□ 0.39
COMMD8-202ENST00000509220 TMEM117Q9H0C3 514 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 SMC3Q9UQE7 1217 aa17.51■□□□□ 0.39
COMMD8-202ENST00000509220 KIAA1671Q9BY89 1806 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 LAD1O00515 517 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 SKIP12755 728 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 IBSPP21815 317 aaPredicted RBP17.5■□□□□ 0.39
COMMD8-202ENST00000509220 RPA1P27694 616 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 POU5F1BQ06416 359 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 PDIA5Q14554 519 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 PCBP1Q15365 356 aaKnown RBP eCLIP17.5■□□□□ 0.39
COMMD8-202ENST00000509220 RILPL1Q5EBL4 403 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 HAUS3Q68CZ6 603 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 CATSPER4Q7RTX7 472 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 RSPH1Q8WYR4 309 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 NACC1Q96RE7 527 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 XPNPEP1Q9NQW7 623 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 AAASQ9NRG9 546 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 DBR1Q9UK59 544 aaKnown RBP17.5■□□□□ 0.39
COMMD8-202ENST00000509220 PLAGL2Q9UPG8 496 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 STK24Q9Y6E0 443 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 VCANP13611 3396 aa17.5■□□□□ 0.39
COMMD8-202ENST00000509220 H3BQV1 296 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 GRM6O15303 877 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 MED24O75448 989 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 SRGAP2CP0DJJ0 459 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 FGFR1P11362 822 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 PTGDRQ13258 359 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 CSPP1Q1MSJ5 1256 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 MCTP1Q6DN14 999 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 ZNF598Q86UK7 904 aaKnown RBP17.49■□□□□ 0.39
COMMD8-202ENST00000509220 PIGOQ8TEQ8 1089 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 RAB34Q9BZG1 259 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 NSUN3Q9H649 340 aaKnown RBP17.49■□□□□ 0.39
COMMD8-202ENST00000509220 BMP2KQ9NSY1 1161 aaPredicted RBP17.49■□□□□ 0.39
COMMD8-202ENST00000509220 PIN4Q9Y237 131 aaKnown RBP17.49■□□□□ 0.39
COMMD8-202ENST00000509220 PCDHB6Q9Y5E3 794 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 PCDHB12Q9Y5F1 795 aa17.49■□□□□ 0.39
COMMD8-202ENST00000509220 XIRP2A4UGR9 3374 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 PRPHP41219 470 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 PHKA2P46019 1235 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 RAB27AP51159 221 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 TFDP1Q14186 410 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 NBR1Q14596 966 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 TWF2Q6IBS0 349 aaKnown RBP17.48■□□□□ 0.39
COMMD8-202ENST00000509220 IFNLR1Q8IU57 520 aaPredicted RBP17.48■□□□□ 0.39
COMMD8-202ENST00000509220 ABI1Q8IZP0 508 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 KLHL23Q8NBE8 558 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 RNF149Q8NC42 400 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 CASD1Q96PB1 797 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 AGPAT5Q9NUQ2 364 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 RNF19AQ9NV58 838 aa17.48■□□□□ 0.39
COMMD8-202ENST00000509220 TYW1Q9NV66 732 aaKnown RBP17.48■□□□□ 0.39
COMMD8-202ENST00000509220 CUL9Q8IWT3 2517 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.47■□□□□ 0.39
COMMD8-202ENST00000509220 NCK2O43639 380 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 ZNF623O75123 536 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 ITGB1P05556 798 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 ATF7P17544 494 aaPredicted RBP17.47■□□□□ 0.39
COMMD8-202ENST00000509220 LAG3P18627 525 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 ARL2P36404 184 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 PTENP60484 403 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 TFF2Q03403 129 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 CUL4AQ13619 759 aa17.47■□□□□ 0.39
COMMD8-202ENST00000509220 SPOUT1Q5T280 376 aaKnown RBP17.47■□□□□ 0.39
COMMD8-202ENST00000509220 LARP1BQ659C4 914 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms