RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 BMS1Q14692 1282 aaKnown RBP18.07■□□□□ 0.48
CXCL1-202ENST00000509101 UGCGQ16739 394 aa18.07■□□□□ 0.48
CXCL1-202ENST00000509101 ASTLQ6HA08 431 aaPredicted RBP18.07■□□□□ 0.48
CXCL1-202ENST00000509101 TMEM173Q86WV6 379 aaPredicted RBP18.07■□□□□ 0.48
CXCL1-202ENST00000509101 ZDHHC14Q8IZN3 488 aa18.07■□□□□ 0.48
CXCL1-202ENST00000509101 VPS52Q8N1B4 723 aa18.07■□□□□ 0.48
CXCL1-202ENST00000509101 TMEM87AQ8NBN3 555 aa18.07■□□□□ 0.48
CXCL1-202ENST00000509101 LIMD1Q9UGP4 676 aa18.07■□□□□ 0.48
CXCL1-202ENST00000509101 ESYT2A0FGR8 921 aa18.06■□□□□ 0.48
CXCL1-202ENST00000509101 CSDE1O75534 798 aaKnown RBP18.06■□□□□ 0.48
CXCL1-202ENST00000509101 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
CXCL1-202ENST00000509101 RNF20Q5VTR2 975 aa18.06■□□□□ 0.48
CXCL1-202ENST00000509101 FRMD5Q7Z6J6 570 aa18.06■□□□□ 0.48
CXCL1-202ENST00000509101 ZNF710Q8N1W2 664 aa18.06■□□□□ 0.48
CXCL1-202ENST00000509101 FEZF2Q8TBJ5 459 aa18.06■□□□□ 0.48
CXCL1-202ENST00000509101 ZMYND12Q9H0C1 365 aa18.06■□□□□ 0.48
CXCL1-202ENST00000509101 DACT1Q9NYF0 836 aa18.06■□□□□ 0.48
CXCL1-202ENST00000509101 GVINP1Q7Z2Y8 2422 aa18.06■□□□□ 0.48
CXCL1-202ENST00000509101 CHMP2AO43633 222 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 DRP2Q13474 957 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 ADCK5Q3MIX3 580 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 LONRF3Q496Y0 759 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 ATAT1Q5SQI0 421 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 MCTP2Q6DN12 878 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 DHX32Q7L7V1 743 aaKnown RBP18.05■□□□□ 0.48
CXCL1-202ENST00000509101 FLCNQ8NFG4 579 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 BCL7CQ8WUZ0 217 aaPredicted RBP18.05■□□□□ 0.48
CXCL1-202ENST00000509101 LPPQ93052 612 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 LENG9Q96B70 501 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 C6orf50Q9HD87 102 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 DISC1Q9NRI5 854 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 NRBP2Q9NSY0 501 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 WDR87Q6ZQQ6 2873 aa18.05■□□□□ 0.48
CXCL1-202ENST00000509101 DCHS1Q96JQ0 3298 aa18.04■□□□□ 0.48
CXCL1-202ENST00000509101 CTSAP10619 480 aa18.04■□□□□ 0.48
CXCL1-202ENST00000509101 ADD1P35611 737 aaKnown RBP18.04■□□□□ 0.48
CXCL1-202ENST00000509101 PHKA2P46019 1235 aa18.04■□□□□ 0.48
CXCL1-202ENST00000509101 CWF19L1Q69YN2 538 aaKnown RBP18.04■□□□□ 0.48
CXCL1-202ENST00000509101 TMC5Q6UXY8 1006 aa18.04■□□□□ 0.48
CXCL1-202ENST00000509101 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
CXCL1-202ENST00000509101 CCDC12Q8WUD4 166 aaPredicted RBP18.04■□□□□ 0.48
CXCL1-202ENST00000509101 USTQ9Y2C2 406 aa18.04■□□□□ 0.48
CXCL1-202ENST00000509101 INPP5FQ9Y2H2 1132 aa18.04■□□□□ 0.48
CXCL1-202ENST00000509101 SPDYE4A6NLX3 237 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 CIITAP33076 1130 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 CLCN5P51795 746 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 RCAN1P53805 252 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 POLGP54098 1239 aaPredicted RBP18.03■□□□□ 0.48
CXCL1-202ENST00000509101 IRX6P78412 446 aaPredicted RBP18.03■□□□□ 0.48
CXCL1-202ENST00000509101 FOXK2Q01167 660 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 TWF2Q6IBS0 349 aaKnown RBP18.03■□□□□ 0.48
CXCL1-202ENST00000509101 DDX53Q86TM3 631 aaKnown RBP18.03■□□□□ 0.48
CXCL1-202ENST00000509101 CABP7Q86V35 215 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 RASEFQ8IZ41 740 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 SLC22A17Q8WUG5 538 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 NKD2Q969F2 451 aaPredicted RBP18.03■□□□□ 0.48
CXCL1-202ENST00000509101 IGSF21Q96ID5 467 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
CXCL1-202ENST00000509101 GBP3Q9H0R5 595 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 NRDE2Q9H7Z3 1164 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 CYP26B1Q9NR63 512 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 TBC1D13Q9NVG8 400 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 SEPT9Q9UHD8 586 aaPredicted RBP18.03■□□□□ 0.48
CXCL1-202ENST00000509101 PIN4Q9Y237 131 aaKnown RBP18.03■□□□□ 0.48
CXCL1-202ENST00000509101 IRAK3Q9Y616 596 aa18.03■□□□□ 0.48
CXCL1-202ENST00000509101 MEIS3P2A8K0S8 358 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 MSH4O15457 936 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 GAS7O60861 476 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 SFPQP23246 707 aaKnown RBP eCLIP18.02■□□□□ 0.48
CXCL1-202ENST00000509101 RNASELQ05823 741 aaKnown RBP18.02■□□□□ 0.48
CXCL1-202ENST00000509101 GIT2Q14161 759 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 MTERF2Q49AM1 385 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 GLB1LQ6UWU2 654 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 CCDC149Q6ZUS6 474 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 UNC45AQ9H3U1 944 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 SFXN1Q9H9B4 322 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 CHST12Q9NRB3 414 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 DNAJB4Q9UDY4 337 aa18.02■□□□□ 0.48
CXCL1-202ENST00000509101 ZNF292O60281 2723 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 A0A087WZ62 844 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 TMEM150BA6NC51 233 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 GALTP07902 379 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 GNA11P29992 359 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 JAK3P52333 1124 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 FGD1P98174 961 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 TARBP2Q15633 366 aaKnown RBP18.01■□□□□ 0.47
CXCL1-202ENST00000509101 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 NOMO2Q5JPE7 1267 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 LRCH2Q5VUJ6 765 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 GJA10Q969M2 543 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 ACSF2Q96CM8 615 aaPredicted RBP18.01■□□□□ 0.47
CXCL1-202ENST00000509101 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 SH2D3AQ9BRG2 576 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 FDXACB1Q9BRP7 624 aaPredicted RBP18.01■□□□□ 0.47
CXCL1-202ENST00000509101 VN1R3Q9BXE9 311 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 TEKT3Q9BXF9 490 aa18.01■□□□□ 0.47
CXCL1-202ENST00000509101 CCDC196A0A1B0GTZ2 297 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 B4GALT3O60512 393 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 SSBP05455 408 aaKnown RBP eCLIP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms