RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 DDX19AQ9NUU7 478 aaKnown RBP20.24■□□□□ 0.83
CLDND1-220ENST00000508902 KIAA1024Q9UPX6 916 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 ADGRA3Q8IWK6 1321 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 BRWD1Q9NSI6 2320 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 E9PMD0 336 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 DGAT1O75907 488 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 SARSP49591 514 aaKnown RBP20.23■□□□□ 0.83
CLDND1-220ENST00000508902 DNM2P50570 870 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 FAM189BP81408 668 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 GRB10Q13322 594 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 HYIQ5T013 277 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 HAUS3Q68CZ6 603 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 SPRYD3Q8NCJ5 442 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 ERMNQ8TAM6 284 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 GDPD5Q8WTR4 605 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 SCLT1Q96NL6 688 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 NACC1Q96RE7 527 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 YME1L1Q96TA2 773 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 GCOM2Q9BZD3 368 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-220ENST00000508902 POLR3FQ9H1D9 316 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-220ENST00000508902 MTUS1Q9ULD2 1270 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 A0A0C4DFX4 3053 aa20.23■□□□□ 0.83
CLDND1-220ENST00000508902 GAS2O43903 313 aaKnown RBP20.22■□□□□ 0.83
CLDND1-220ENST00000508902 SRGAP2CP0DJJ0 459 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 FOSL2P15408 326 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 IBSPP21815 317 aaPredicted RBP20.22■□□□□ 0.83
CLDND1-220ENST00000508902 MUTP22033 750 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 AMHR2Q16671 573 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 ARL6IP4Q66PJ3 421 aaKnown RBP20.22■□□□□ 0.83
CLDND1-220ENST00000508902 MAEAQ7L5Y9 396 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 ZNF710Q8N1W2 664 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 RNF149Q8NC42 400 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 USP28Q96RU2 1077 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 BHMT2Q9H2M3 363 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 XIRP2A4UGR9 3374 aa20.22■□□□□ 0.83
CLDND1-220ENST00000508902 EDN1P05305 212 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 FGFR1P11362 822 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 TMEM119Q4V9L6 283 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 FAM102BQ5T8I3 360 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 PADI6Q6TGC4 694 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 USP49Q70CQ1 688 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 SLC24A5Q71RS6 500 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 ZNF598Q86UK7 904 aaKnown RBP20.21■□□□□ 0.83
CLDND1-220ENST00000508902 IFNLR1Q8IU57 520 aaPredicted RBP20.21■□□□□ 0.83
CLDND1-220ENST00000508902 DAW1Q8N136 415 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 PLXNA4Q9HCM2 1894 aa20.21■□□□□ 0.83
CLDND1-220ENST00000508902 DENND3A2RUS2 1198 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 MEIS3P2A8K0S8 358 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 CYP11B2P19099 503 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 HOXA11P31270 313 aaPredicted RBP20.2■□□□□ 0.82
CLDND1-220ENST00000508902 PTENP60484 403 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 MBTD1Q05BQ5 628 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 UBXN11Q5T124 520 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 ECHDC2Q86YB7 292 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 TCP11Q8WWU5 503 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 TGS1Q96RS0 853 aaKnown RBP20.2■□□□□ 0.82
CLDND1-220ENST00000508902 PLIN2Q99541 437 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 RUSC1Q9BVN2 902 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 C1orf112Q9NSG2 853 aa20.2■□□□□ 0.82
CLDND1-220ENST00000508902 FBXO2Q9UK22 296 aaPredicted RBP20.2■□□□□ 0.82
CLDND1-220ENST00000508902 MRPL42Q9Y6G3 142 aaKnown RBP20.2■□□□□ 0.82
CLDND1-220ENST00000508902 VCANP13611 3396 aa20.19■□□□□ 0.82
CLDND1-220ENST00000508902 ARHGEF35A5YM69 484 aa20.19■□□□□ 0.82
CLDND1-220ENST00000508902 TTLL13PA6NNM8 815 aa20.19■□□□□ 0.82
CLDND1-220ENST00000508902 MAPK7Q13164 816 aa20.19■□□□□ 0.82
CLDND1-220ENST00000508902 PAN2Q504Q3 1202 aaKnown RBP20.19■□□□□ 0.82
CLDND1-220ENST00000508902 EPC2Q52LR7 807 aa20.19■□□□□ 0.82
CLDND1-220ENST00000508902 FOXD4L5Q5VV16 416 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-220ENST00000508902 EXOC8Q8IYI6 725 aa20.19■□□□□ 0.82
CLDND1-220ENST00000508902 FOXD4L4Q8WXT5 416 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-220ENST00000508902 AGPAT5Q9NUQ2 364 aa20.19■□□□□ 0.82
CLDND1-220ENST00000508902 MYH11P35749 1972 aa20.19■□□□□ 0.82
CLDND1-220ENST00000508902 EYA4O95677 639 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 SFPQP23246 707 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLDND1-220ENST00000508902 MARCKSP29966 332 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-220ENST00000508902 CDC42EP1Q00587 391 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 CLLU1OSQ5K130 101 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 ODR4Q5SWX8 454 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 KRT79Q5XKE5 535 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 CATSPER4Q7RTX7 472 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 SRGAP1Q7Z6B7 1085 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 MAFAQ8NHW3 353 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-220ENST00000508902 CLP1Q92989 425 aaKnown RBP20.18■□□□□ 0.82
CLDND1-220ENST00000508902 RAB34Q9BZG1 259 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 TMEM161AQ9NX61 479 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 PIN4Q9Y237 131 aaKnown RBP20.18■□□□□ 0.82
CLDND1-220ENST00000508902 MTCH2Q9Y6C9 303 aa20.18■□□□□ 0.82
CLDND1-220ENST00000508902 ASAP2O43150 1006 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 B4GALT5O43286 388 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 TSPAN1O60635 241 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 CEBPZQ03701 1054 aaKnown RBP20.17■□□□□ 0.82
CLDND1-220ENST00000508902 MXD4Q14582 209 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-220ENST00000508902 SPECC1Q5M775 1068 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 CDCA2Q69YH5 1023 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-220ENST00000508902 LRRC55Q6ZSA7 311 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 TMEM192Q8IY95 271 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 CMTR2Q8IYT2 770 aaKnown RBP20.17■□□□□ 0.82
CLDND1-220ENST00000508902 CCDC43Q96MW1 224 aaKnown RBP20.17■□□□□ 0.82
CLDND1-220ENST00000508902 CLIC6Q96NY7 704 aa20.17■□□□□ 0.82
CLDND1-220ENST00000508902 KIFC3Q9BVG8 833 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms