RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 NCAPH2Q6IBW4 605 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 PDE12Q6L8Q7 609 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 B3GNT9Q6UX72 402 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 ANO5Q75V66 913 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 ECHDC2Q86YB7 292 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 LRRC43Q8N309 656 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 COLGALT1Q8NBJ5 622 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 CEP170P1Q96L14 293 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 NLRP4Q96MN2 994 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 FDXACB1Q9BRP7 624 aaPredicted RBP11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 KCNMB3Q9NPA1 279 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 TLR9Q9NR96 1032 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 PRKAG3Q9UGI9 489 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 CD207Q9UJ71 328 aa11.3□□□□□ -0.6
UBE2D3-227ENST00000508818 IGKV6-21A0A0C4DH24 114 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 A0A0U1RQF3 1178 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 LINC01565O15544 149 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 STBD1O95210 358 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 SRGAP2BP0DMP2 458 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 SKIP12755 728 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 IRS1P35568 1242 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 PPM1AP35813 382 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 LTBRP36941 435 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 RFC5P40937 340 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 FOSBP53539 338 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 DRP2Q13474 957 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 SMAD4Q13485 552 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 BMS1Q14692 1282 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 SAFBQ15424 915 aaKnown RBP eCLIP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 ME3Q16798 604 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 PLA2G4FQ68DD2 849 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 ZNF410Q86VK4 478 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 TPH2Q8IWU9 490 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 EFHBQ8N7U6 833 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 TMEM87AQ8NBN3 555 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 CCDC43Q96MW1 224 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 CASD1Q96PB1 797 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 POP1Q99575 1024 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 MRPL9Q9BYD2 267 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 ZSWIM4Q9H7M6 989 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 CD320Q9NPF0 282 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 VAV3Q9UKW4 847 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 PIN4Q9Y237 131 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 SPTBN5Q9NRC6 3674 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-227ENST00000508818 FSD2A1L4K1 749 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 PI4K2BG5E9Z4 385 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 SRGAP2CP0DJJ0 459 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 FDPSP14324 419 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 YWHABP31946 246 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 CA8P35219 290 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 ALDH7A1P49419 539 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 NPEPPSP55786 919 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 DLX2Q07687 328 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 NR5A1Q13285 461 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 CALCRLQ16602 461 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 XKR9Q5GH70 373 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 KCNT2Q6UVM3 1135 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 ADGRD2Q7Z7M1 963 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 KSR1Q8IVT5 923 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 ADHFE1Q8IWW8 467 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 MRPS27Q92552 414 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 HAS1Q92839 578 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 TMEM143Q96AN5 459 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 LXNQ9BS40 222 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 CWH43Q9H720 699 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 ENTPD7Q9NQZ7 604 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 SPG21Q9NZD8 308 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 PCDHA12Q9UN75 941 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 LZTS1Q9Y250 596 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 COL4A3BPQ9Y5P4 624 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 REV3LO60673 3130 aa11.28□□□□□ -0.6
UBE2D3-227ENST00000508818 BTBD18B2RXH4 712 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 PER2O15055 1255 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 ASAP2O43150 1006 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 MBTPS2O43462 519 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 TBX10O75333 385 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 ATP2B1P20020 1258 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 TXKP42681 527 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 PHKA2P46019 1235 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 RAB27AP51159 221 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 ERVFC1P60507 584 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 CYP4A11Q02928 519 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 NCBP1Q09161 790 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 CTTNQ14247 550 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 SMAD2Q15796 467 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms