RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ARHGEF12Q9NZN5 1544 aa5.79□□□□□ -1.48
PDLIM5-211ENST00000508531 CAMSAP1Q5T5Y3 1602 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 ABCA9Q8IUA7 1624 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 GOLGA6L22H0YM25 854 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 NARSO43776 548 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 HIP1RO75146 1068 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 KCNA6P17658 529 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 SDHAP31040 664 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 HGFACQ04756 655 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 CATSPEREQ5SY80 951 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 ABHD17CQ6PCB6 329 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 LRP10Q7Z4F1 713 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 FGD2Q7Z6J4 655 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 MTERF4Q7Z6M4 381 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 SGMS1Q86VZ5 419 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 IGSF22Q8N9C0 903 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 SHCBP1Q8NEM2 672 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 CALML6Q8TD86 181 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 SRPK1Q96SB4 655 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 NELFAQ9H3P2 528 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 MSL2Q9HCI7 577 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 TRAPPC8Q9Y2L5 1435 aa5.78□□□□□ -1.48
PDLIM5-211ENST00000508531 ATP10AO60312 1499 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 RICTORQ6R327 1708 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 TCRBV16S1A1N1A0A5B0 115 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 SLC26A4O43511 780 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 TPM2P07951 284 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 APEX1P27695 318 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 TGFB2P61812 414 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 IRF9Q00978 393 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 ADAM15Q13444 863 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 TMEM177Q53S58 311 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 BCL6BQ8N143 479 aaPredicted RBP5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 D2HGDHQ8N465 521 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 C2orf69Q8N8R5 385 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 CACTINQ8WUQ7 758 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 PDCL3Q9H2J4 239 aa5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 PNNQ9H307 717 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 AGO3Q9H9G7 860 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-211ENST00000508531 ZBED9Q6R2W3 1325 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 SCAPERQ9BY12 1400 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 EFCAB5A4FU69 1503 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 PLEKHD1A6NEE1 506 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 CAPN14A8MX76 684 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 KRT37O76014 449 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 MCM7P33993 719 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 STAT3P40763 770 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 HHEXQ03014 270 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 RBL2Q08999 1139 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 AFAP1Q8N556 730 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 ZSWIM2Q8NEG5 633 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 MRPL4Q9BYD3 311 aaKnown RBP5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 MAGEL2Q9UJ55 1249 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 ISY1Q9ULR0 285 aaKnown RBP5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 HECW1Q76N89 1606 aa5.76□□□□□ -1.49
PDLIM5-211ENST00000508531 C9orf84Q5VXU9 1444 aa5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 RRBP1Q9P2E9 1410 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 SETD1AO15047 1707 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 ZBTB48P10074 688 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 ALDH6A1Q02252 535 aaKnown RBP5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 MAP3K12Q12852 859 aa5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 RIN1Q13671 783 aa5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 ACAP1Q15027 740 aa5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 RTN4RL1Q86UN2 441 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 THAP3Q8WTV1 239 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 ARMC5Q96C12 935 aa5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 FOXRED1Q96CU9 486 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 C8orf37Q96NL8 207 aa5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 HECAQ9UBI9 543 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 PTCH2Q9Y6C5 1203 aa5.75□□□□□ -1.49
PDLIM5-211ENST00000508531 CLIP1P30622 1438 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 NPTXRO95502 500 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 ATP2C1P98194 919 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 TUBA3CQ13748 450 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 SAFB2Q14151 953 aaKnown RBP eCLIP5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 SPTY2D1Q68D10 685 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 CC2D1AQ6P1N0 951 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 TUBA3EQ6PEY2 450 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 ADGRE4PQ86SQ3 457 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 JMYQ8N9B5 988 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 PMFBP1Q8TBY8 1022 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 NEU4Q8WWR8 484 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 CHFRQ96EP1 664 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 FOXB1Q99853 325 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 BOCQ9BWV1 1114 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 TRIM8Q9BZR9 551 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 TRIM39Q9HCM9 518 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 GIT1Q9Y2X7 761 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 CTDP1Q9Y5B0 961 aaPredicted RBP5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 RAPGEF2Q9Y4G8 1499 aa5.74□□□□□ -1.49
PDLIM5-211ENST00000508531 C3P01024 1663 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 MAGI2Q86UL8 1455 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 CCDC163A0A0D9SF12 145 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 A0A1W2PRX2 142 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 PMS2P1A4D2B8 440 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 M0R2C6 588 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 KCNQ2O43526 872 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 MAFO75444 373 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 TNNT2P45379 298 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 TERF1P54274 439 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms