RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 ZBTB21Q9ULJ3 1066 aa7.72□□□□□ -1.17
CHD1-204ENST00000505982 VSTM5A8MXK1 200 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 OSMP13725 252 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 MANFP55145 182 aaKnown RBP7.71□□□□□ -1.18
CHD1-204ENST00000505982 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.71□□□□□ -1.18
CHD1-204ENST00000505982 MINDY4Q4G0A6 757 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 PPP4R4Q6NUP7 873 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 ZNF761Q86XN6 746 aaPredicted RBP7.71□□□□□ -1.18
CHD1-204ENST00000505982 SMARCC2Q8TAQ2 1214 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 EAF2Q96CJ1 260 aaPredicted RBP7.71□□□□□ -1.18
CHD1-204ENST00000505982 TOE1Q96GM8 510 aaKnown RBP7.71□□□□□ -1.18
CHD1-204ENST00000505982 MYL10Q9BUA6 226 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 BCAS3Q9H6U6 928 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 UCKL1Q9NWZ5 548 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 DTLQ9NZJ0 730 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 PPP2R3BQ9Y5P8 575 aa7.71□□□□□ -1.18
CHD1-204ENST00000505982 GOLGA6L22H0YM25 854 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 PRPF6O94906 941 aaKnown RBP7.7□□□□□ -1.18
CHD1-204ENST00000505982 MYL1P05976 194 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 AOAHP28039 575 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 SLC6A3Q01959 620 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 ROM1Q03395 351 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 DBPQ10586 325 aaPredicted RBP7.7□□□□□ -1.18
CHD1-204ENST00000505982 RTN4RL1Q86UN2 441 aaPredicted RBP7.7□□□□□ -1.18
CHD1-204ENST00000505982 JADE3Q92613 823 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 PSMD1Q99460 953 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 PDGFDQ9GZP0 370 aaPredicted RBP7.7□□□□□ -1.18
CHD1-204ENST00000505982 SPATA6Q9NWH7 488 aaPredicted RBP7.7□□□□□ -1.18
CHD1-204ENST00000505982 RCAN3Q9UKA8 241 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 GPR45Q9Y5Y3 372 aa7.7□□□□□ -1.18
CHD1-204ENST00000505982 MATN3O15232 486 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 LPLP06858 475 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 MTHFD2P13995 350 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 MC4RP32245 332 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 CACNB2Q08289 660 aaPredicted RBP7.69□□□□□ -1.18
CHD1-204ENST00000505982 HLTFQ14527 1009 aaKnown RBP eCLIP7.69□□□□□ -1.18
CHD1-204ENST00000505982 MAP9Q49MG5 647 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 SLFN12LQ6IEE8 588 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 KSR2Q6VAB6 950 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 ETV3LQ6ZN32 361 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 FAM126BQ8IXS8 530 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 MIER2Q8N344 545 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 TTC9BQ8N6N2 239 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 ZBTB8AQ96BR9 441 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 FOXRED1Q96CU9 486 aaPredicted RBP7.69□□□□□ -1.18
CHD1-204ENST00000505982 MAML3Q96JK9 1138 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 SAMD11Q96NU1 681 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 NOX5Q96PH1 765 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 ORAI2Q96SN7 254 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 NUP88Q99567 741 aaPredicted RBP7.69□□□□□ -1.18
CHD1-204ENST00000505982 CSRNP2Q9H175 543 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 SRRDQ9UH36 339 aa7.69□□□□□ -1.18
CHD1-204ENST00000505982 PRSS38A1L453 326 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 C1QTNF3-AMACRE9PGA6 284 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 ELL2O00472 640 aaPredicted RBP7.68□□□□□ -1.18
CHD1-204ENST00000505982 PRLP01236 227 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 AGXTP21549 392 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 PTGS1P23219 599 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 STAT5AP42229 794 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 ADCY2Q08462 1091 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 GTF2H3Q13889 308 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 ARHGAP29Q52LW3 1261 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 ZBTB41Q5SVQ8 909 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 IFIT1BQ5T764 474 aaKnown RBP7.68□□□□□ -1.18
CHD1-204ENST00000505982 CD276Q5ZPR3 534 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 CALML6Q8TD86 181 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 RAX2Q96IS3 184 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 LOXL4Q96JB6 756 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 SLC2A13Q96QE2 648 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 C1QTNF3Q9BXJ4 246 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 SLC39A2Q9NP94 309 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 PRDM11Q9NQV5 511 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 OBP2AQ9NY56 170 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 BTBD7Q9P203 1132 aa7.68□□□□□ -1.18
CHD1-204ENST00000505982 PLATP00750 562 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 HSPA6P17066 643 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 SLC5A3P53794 718 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 NKX3-2P78367 333 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 ALDH6A1Q02252 535 aaKnown RBP7.67□□□□□ -1.18
CHD1-204ENST00000505982 KIAA2012Q0VF49 1180 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 PITRM1Q5JRX3 1037 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 KIAA1841Q6NSI8 718 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 TEPPQ6URK8 271 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 ZC3H18Q86VM9 953 aaKnown RBP7.67□□□□□ -1.18
CHD1-204ENST00000505982 DGKHQ86XP1 1220 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 WDR48Q8TAF3 677 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 ADAMTS17Q8TE56 1095 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 AUTS2Q8WXX7 1259 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 RPGRQ92834 1020 aaKnown RBP7.67□□□□□ -1.18
CHD1-204ENST00000505982 AIFM3Q96NN9 605 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 FOXB1Q99853 325 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 WNT8AQ9H1J5 351 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 NMRK2Q9NPI5 230 aa7.67□□□□□ -1.18
CHD1-204ENST00000505982 ZRANB2O95218 330 aaKnown RBP eCLIP7.66□□□□□ -1.18
CHD1-204ENST00000505982 LRG1P02750 347 aa7.66□□□□□ -1.18
CHD1-204ENST00000505982 ENO2P09104 434 aaPredicted RBP7.66□□□□□ -1.18
CHD1-204ENST00000505982 MTNR1BP49286 362 aa7.66□□□□□ -1.18
CHD1-204ENST00000505982 RGS3P49796 1198 aa7.66□□□□□ -1.18
CHD1-204ENST00000505982 MRPS9P82933 396 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms