RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 SLC16A10Q8TF71 515 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 ZKSCAN4Q969J2 545 aaPredicted RBP21.24■□□□□ 0.99
SDHA-206ENST00000505555 ATG4CQ96DT6 458 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 INPP4AQ96PE3 977 aaPredicted RBP21.24■□□□□ 0.99
SDHA-206ENST00000505555 KCNK3O14649 394 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 ZBED4O75132 1171 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 CCNE2O96020 404 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 H2AFZP0C0S5 128 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 PLS3P13797 630 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 NPEPPSP55786 919 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 RPS6KA1Q15418 735 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 PLA2G4FQ68DD2 849 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 PHLDB3Q6NSJ2 640 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 H2AFVQ71UI9 128 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 SND1Q7KZF4 910 aaKnown RBP eCLIP21.23■□□□□ 0.99
SDHA-206ENST00000505555 SLC9A9Q8IVB4 645 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 FAM71BQ8TC56 605 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 PDCD2LQ9BRP1 358 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 PXMP2Q9NR77 195 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 TBC1D22BQ9NU19 505 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 RNF14Q9UBS8 474 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 FER1L6Q2WGJ9 1857 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 MYH11P35749 1972 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 VWA5AO00534 786 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 GLI1P08151 1106 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 TGFB2P61812 414 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 ARHGEF16Q5VV41 709 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.23■□□□□ 0.99
SDHA-206ENST00000505555 TPCN2Q8NHX9 752 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 CCDC43Q96MW1 224 aaKnown RBP21.23■□□□□ 0.99
SDHA-206ENST00000505555 PSD3Q9NYI0 1048 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 APEX2Q9UBZ4 518 aa21.23■□□□□ 0.99
SDHA-206ENST00000505555 ZSCAN5CA6NGD5 496 aaPredicted RBP21.22■□□□□ 0.99
SDHA-206ENST00000505555 SLC16A4O15374 487 aa21.22■□□□□ 0.99
SDHA-206ENST00000505555 GGCXP38435 758 aa21.22■□□□□ 0.99
SDHA-206ENST00000505555 LMAN1P49257 510 aa21.22■□□□□ 0.99
SDHA-206ENST00000505555 AARSP49588 968 aaKnown RBP eCLIP21.22■□□□□ 0.99
SDHA-206ENST00000505555 PEX3P56589 373 aa21.22■□□□□ 0.99
SDHA-206ENST00000505555 SLC30A5Q8TAD4 765 aa21.22■□□□□ 0.99
SDHA-206ENST00000505555 TAF4BQ92750 862 aa21.22■□□□□ 0.99
SDHA-206ENST00000505555 KRT12Q99456 494 aa21.22■□□□□ 0.99
SDHA-206ENST00000505555 CNOT7Q9UIV1 285 aaKnown RBP21.22■□□□□ 0.99
SDHA-206ENST00000505555 KIF4AO95239 1232 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 GALCP54803 685 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 BAATQ14032 418 aaPredicted RBP21.21■□□□□ 0.99
SDHA-206ENST00000505555 HAUS6Q7Z4H7 955 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 EXOC4Q96A65 974 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 ACCSQ96QU6 501 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 MED4Q9NPJ6 270 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 EMSYQ7Z589 1322 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 ESYT3A0FGR9 886 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 AGPSO00116 658 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 KRT13P13646 458 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 PPP3CAQ08209 521 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 LMO3Q8TAP4 145 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 TMEM206Q9H813 350 aa21.21■□□□□ 0.99
SDHA-206ENST00000505555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.21■□□□□ 0.994e-6■■■■■ 51.6
SDHA-206ENST00000505555 FOXN3O00409 490 aaPredicted RBP21.2■□□□□ 0.98
SDHA-206ENST00000505555 RNF40O75150 1001 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 ANXA13P27216 316 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 GCLMP48507 274 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 XKR9Q5GH70 373 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 FAM102BQ5T8I3 360 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 CALCOCO1Q9P1Z2 691 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 TCEAL9Q9UHQ7 104 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 LYPLA2O95372 231 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 VAMP7P51809 220 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 IFI16Q16666 785 aaKnown RBP21.2■□□□□ 0.98
SDHA-206ENST00000505555 USP38Q8NB14 1042 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 OSGEPQ9NPF4 335 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 RNF146Q9NTX7 359 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 MAP3K20Q9NYL2 800 aaKnown RBP21.2■□□□□ 0.98
SDHA-206ENST00000505555 HSPBP1Q9NZL4 362 aa21.2■□□□□ 0.98
SDHA-206ENST00000505555 GOLGA8IPA6NC78 632 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 GOLGA8JA6NMD2 632 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 CEP104O60308 925 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 ABCB4P21439 1286 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 HNRNPH2P55795 449 aaKnown RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 GUCY2DQ02846 1103 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 PALB2Q86YC2 1186 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 KLHL7Q8IXQ5 586 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 C4orf19Q8IY42 314 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 PLEKHO2Q8TD55 490 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 KIFC3Q9BVG8 833 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 EPB41L5Q9HCM4 733 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 UBE2TQ9NPD8 197 aaPredicted RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 SEPT11Q9NVA2 429 aaKnown RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 TAS2R14Q9NYV8 317 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 HEXIM1O94992 359 aaKnown RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 MAPTP10636 758 aaKnown RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 RPS12P25398 132 aaKnown RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 CARSP49589 748 aaKnown RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 BACE1P56817 501 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 PSMC5P62195 406 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 MYBPC2Q14324 1141 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 KCTD19Q17RG1 926 aaPredicted RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 GLE1Q53GS7 698 aaKnown RBP21.19■□□□□ 0.98
SDHA-206ENST00000505555 C1orf220Q5T0J3 134 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 DAAM2Q86T65 1068 aa21.19■□□□□ 0.98
SDHA-206ENST00000505555 ARHGEF19Q8IW93 802 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms