RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PLCH2O75038 1416 aa6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 NAIPQ13075 1403 aa6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 PTPRKQ15262 1439 aa6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 KIAA1107Q9UPP5 1409 aa6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 SUV39H1O43463 412 aa6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 NARSO43776 548 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 GLRX3O76003 335 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 ALDH6A1Q02252 535 aaKnown RBP6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 SQSTM1Q13501 440 aa6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 C2orf69Q8N8R5 385 aa6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 ERCC4Q92889 916 aaPredicted RBP6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 ARHGAP5Q13017 1502 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 TRAF5O00463 557 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 SLC26A4O43511 780 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 DNAJC8O75937 253 aaPredicted RBP6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 RPS19P39019 145 aaKnown RBP6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 RGS3P49796 1198 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 ADAM8P78325 824 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 ADAM15Q13444 863 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 CC2D1AQ6P1N0 951 aaPredicted RBP6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 RTKN2Q8IZC4 609 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 RIMBP3CA6NJZ7 1639 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 RIMBP3BA6NNM3 1639 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 RIMBP3Q9UFD9 1639 aa6.93□□□□□ -1.3
DEPDC1B-203ENST00000505017 CCDC141Q6ZP82 1450 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 MAPKBP1O60336 1514 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 SAMD9LQ8IVG5 1584 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 MAST1Q9Y2H9 1570 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 CCDC163A0A0D9SF12 145 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 M0R2C6 588 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 NPTXRO95502 500 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 APEX1P27695 318 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 ZNF460Q14592 562 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 FNDC7Q5VTL7 733 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 EFCAB2Q5VUJ9 269 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 CACTINQ8WUQ7 758 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 DNAJC2Q99543 621 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 FOXB1Q99853 325 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 ZNF341Q9BYN7 854 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 TLR9Q9NR96 1032 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 ANKRD30AQ9BXX3 1397 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 MBD5Q9P267 1494 aa6.92□□□□□ -1.3
DEPDC1B-203ENST00000505017 CFAP74Q9C0B2 1584 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 PMS2P1A4D2B8 440 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 PLD2O14939 933 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 PRLP01236 227 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 ACRV1P26436 265 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 MEOX1P50221 254 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 GRM7Q14831 915 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 ZCCHC8Q6NZY4 707 aaKnown RBP6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 C1orf210Q8IVY1 113 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 SHCBP1Q8NEM2 672 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 TMEM176AQ96HP8 235 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 BOCQ9BWV1 1114 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 FAM184BQ9ULE4 1060 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 TNPO3Q9Y5L0 923 aaKnown RBP6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 NCOA1Q15788 1441 aa6.91□□□□□ -1.3
DEPDC1B-203ENST00000505017 C2orf78A6NCI8 922 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 KRT37O76014 449 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 TSPY4P0CV99 314 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 TSPY10P0CW01 314 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 ADCY7P51828 1080 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 ATP2C1P98194 919 aaPredicted RBP6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 PTH1RQ03431 593 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 CREB3L3Q68CJ9 461 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 NKD2Q969F2 451 aaPredicted RBP6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 C16orf92Q96LL3 132 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 MENTQ9BUN1 341 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 MSL2Q9HCI7 577 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 SAMD15Q9P1V8 674 aa6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 ZNF644Q9H582 1327 aaPredicted RBP6.9□□□□□ -1.3
DEPDC1B-203ENST00000505017 C9orf84Q5VXU9 1444 aa6.9□□□□□ -1.31
DEPDC1B-203ENST00000505017 ABCC1P33527 1531 aa6.9□□□□□ -1.31
DEPDC1B-203ENST00000505017 HIP1RO75146 1068 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 SDSP20132 328 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 PTX3P26022 381 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 KIF11P52732 1056 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 SLC6A3Q01959 620 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 RIN1Q13671 783 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 FAM89AQ96GI7 184 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 GPHA2Q96T91 129 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 OSBPL2Q9H1P3 480 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 NELFAQ9H3P2 528 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 CEP72Q9P209 647 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 SH3BP1Q9Y3L3 701 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 SYCP2Q9BX26 1530 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 PLXNC1O60486 1568 aa6.89□□□□□ -1.31
DEPDC1B-203ENST00000505017 GLI2P10070 1586 aa6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 RTEL1-TNFRSF6BF6WH68 1400 aa6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 PPP1R12AO14974 1030 aaPredicted RBP6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 HIBADHP31937 336 aaKnown RBP6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 FNTBP49356 437 aa6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 SOGA3Q5TF21 947 aa6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 CHST14Q8NCH0 376 aa6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 WDR48Q8TAF3 677 aa6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 CALML6Q8TD86 181 aa6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 VWA7Q9Y334 891 aa6.88□□□□□ -1.31
DEPDC1B-203ENST00000505017 FANCAO15360 1455 aa6.87□□□□□ -1.31
DEPDC1B-203ENST00000505017 PTPDC1A2A3K4 754 aa6.87□□□□□ -1.31
DEPDC1B-203ENST00000505017 ZNF202O95125 648 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms