RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 FAM237AA0A1B0GTK4 181 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 HIP1RO75146 1068 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 SYKP43405 635 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 EPHB4P54760 987 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 RAD51AP2Q09MP3 1159 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 IKBKEQ14164 716 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 E2F4Q16254 413 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 TMEM240Q5SV17 173 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 PRPF38BQ5VTL8 546 aaKnown RBP20.14■□□□□ 0.81
DDR1-254ENST00000504679 CNKSR3Q6P9H4 555 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 SRGAP1Q7Z6B7 1085 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 CEP57L1Q8IYX8 460 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 DBF4BQ8NFT6 615 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 ASAP3Q8TDY4 903 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 APBB2Q92870 758 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 IFIH1Q9BYX4 1025 aaKnown RBP20.14■□□□□ 0.81
DDR1-254ENST00000504679 C17orf75Q9HAS0 396 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 NOC2LQ9Y3T9 749 aaKnown RBP20.14■□□□□ 0.81
DDR1-254ENST00000504679 CEP290O15078 2479 aa20.14■□□□□ 0.81
DDR1-254ENST00000504679 TANC1Q9C0D5 1861 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 DARSP14868 501 aaKnown RBP20.13■□□□□ 0.81
DDR1-254ENST00000504679 PHKA2P46019 1235 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 NFX1Q12986 1120 aaKnown RBP20.13■□□□□ 0.81
DDR1-254ENST00000504679 PAK2Q13177 524 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 CLEC17AQ6ZS10 378 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 VWCEQ96DN2 955 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDR1-254ENST00000504679 OSBPL7Q9BZF2 842 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 AGO3Q9H9G7 860 aaKnown RBP20.13■□□□□ 0.81
DDR1-254ENST00000504679 MAGEF1Q9HAY2 307 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 IFT122Q9HBG6 1241 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 ODF2LQ9ULJ1 636 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 PADI3Q9ULW8 664 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 ST3GAL5Q9UNP4 418 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 HPSEQ9Y251 543 aa20.13■□□□□ 0.81
DDR1-254ENST00000504679 NPHP3-ACAD11A0A0J9YXS1 232 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 LRRIQ4A6NIV6 560 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 SFI1A8K8P3 1242 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 SLFN14P0C7P3 912 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 CD52P31358 61 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 NAMPTP43490 491 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 NDUFA8P51970 172 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 PTENP60484 403 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 CAPSQ13938 189 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 GIT2Q14161 759 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 CHRDL2Q6WN34 429 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 OTOP2Q7RTS6 562 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 TMEM40Q8WWA1 233 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 GBP4Q96PP9 640 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 NFKBIZQ9BYH8 718 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 MTIF3Q9H2K0 278 aaKnown RBP20.12■□□□□ 0.81
DDR1-254ENST00000504679 TNMDQ9H2S6 317 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 KBTBD4Q9NVX7 518 aa20.12■□□□□ 0.81
DDR1-254ENST00000504679 LARSQ9P2J5 1176 aaKnown RBP20.12■□□□□ 0.81
DDR1-254ENST00000504679 ABHD14A-ACY1A0A1B0GW23 586 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 MYMKA6NI61 221 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 EFCAB14O75071 495 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 SMTNP53814 917 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 PEX3P56589 373 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 SHHQ15465 462 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 DYMQ7RTS9 669 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 ZBTB8OSQ8IWT0 167 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 DAW1Q8N136 415 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 TMEM87AQ8NBN3 555 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 DEPTORQ8TB45 409 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 HERVK_113Q902F9 699 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 DDX12PQ92771 950 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 STAMQ92783 540 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 REEP2Q9BRK0 252 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 FTHL17Q9BXU8 183 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 C2orf40Q9H1Z8 148 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 ERVK-5Q9HDB9 667 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 SERTAD1Q9UHV2 236 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 TET1Q8NFU7 2136 aa20.11■□□□□ 0.81
DDR1-254ENST00000504679 CCDC169A6NNP5 214 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 TBCAO75347 108 aaKnown RBP20.1■□□□□ 0.81
DDR1-254ENST00000504679 CSDE1O75534 798 aaKnown RBP20.1■□□□□ 0.81
DDR1-254ENST00000504679 BAIAP3O94812 1187 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 FAM13AO94988 1023 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 ZNF202O95125 648 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 PLS3P13797 630 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 SFPQP23246 707 aaKnown RBP eCLIP20.1■□□□□ 0.81
DDR1-254ENST00000504679 NCBP1Q09161 790 aaKnown RBP20.1■□□□□ 0.81
DDR1-254ENST00000504679 MAPK7Q13164 816 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 DMP1Q13316 513 aaPredicted RBP20.1■□□□□ 0.81
DDR1-254ENST00000504679 PCBP1Q15365 356 aaKnown RBP eCLIP20.1■□□□□ 0.81
DDR1-254ENST00000504679 LONRF3Q496Y0 759 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 FAM228AQ86W67 206 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 IFNLR1Q8IU57 520 aaPredicted RBP20.1■□□□□ 0.81
DDR1-254ENST00000504679 MYCT1Q8N699 235 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 BSNDQ8WZ55 320 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 NTPCRQ9BSD7 190 aaKnown RBP20.1■□□□□ 0.81
DDR1-254ENST00000504679 ZHX3Q9H4I2 956 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 KMT5AQ9NQR1 393 aa20.1■□□□□ 0.81
DDR1-254ENST00000504679 INO80B-WBP1J3KQ70 363 aa20.09■□□□□ 0.81
DDR1-254ENST00000504679 PRPF40AO75400 957 aaKnown RBP20.09■□□□□ 0.81
DDR1-254ENST00000504679 ZSCAN20P17040 1043 aaPredicted RBP20.09■□□□□ 0.81
DDR1-254ENST00000504679 NPTX2P47972 431 aa20.09■□□□□ 0.81
DDR1-254ENST00000504679 EFNA5P52803 228 aa20.09■□□□□ 0.81
DDR1-254ENST00000504679 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms