RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.02
SKP2-203ENST00000504386 BHMT2Q9H2M3 363 aa8.65□□□□□ -1.02
SKP2-203ENST00000504386 NKX2-4Q9H2Z4 354 aa8.65□□□□□ -1.02
SKP2-203ENST00000504386 SEMA6BQ9H3T3 888 aa8.65□□□□□ -1.02
SKP2-203ENST00000504386 AGO3Q9H9G7 860 aaKnown RBP8.65□□□□□ -1.02
SKP2-203ENST00000504386 DDX19AQ9NUU7 478 aaKnown RBP8.65□□□□□ -1.02
SKP2-203ENST00000504386 TMEM161AQ9NX61 479 aa8.65□□□□□ -1.02
SKP2-203ENST00000504386 MTMR10Q9NXD2 777 aa8.65□□□□□ -1.02
SKP2-203ENST00000504386 MTMR6Q9Y217 621 aa8.65□□□□□ -1.02
SKP2-203ENST00000504386 STXBP5LQ9Y2K9 1186 aa8.65□□□□□ -1.02
SKP2-203ENST00000504386 NOC2LQ9Y3T9 749 aaKnown RBP8.65□□□□□ -1.02
SKP2-203ENST00000504386 TNRC18O15417 2968 aaPredicted RBP8.65□□□□□ -1.02
SKP2-203ENST00000504386 BRCA2P51587 3418 aa8.65□□□□□ -1.03
SKP2-203ENST00000504386 A0A087WZ62 844 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 RB1P06400 928 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 CA3P07451 260 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 NAMPTP43490 491 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 SMTNP53814 917 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 DEFB103AP81534 67 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 DMP1Q13316 513 aaPredicted RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 SLC39A14Q15043 492 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 PTPROQ16827 1216 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 NAALADL2Q58DX5 795 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 FAM102BQ5T8I3 360 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 TWF2Q6IBS0 349 aaKnown RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 CABP7Q86V35 215 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 FAM228AQ86W67 206 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 FIBCD1Q8N539 461 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 SLC17A8Q8NDX2 589 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 DEPTORQ8TB45 409 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 KCNG4Q8TDN1 519 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 TMEM143Q96AN5 459 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 ZBTB10Q96DT7 871 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 FDXACB1Q9BRP7 624 aaPredicted RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 C11orf84Q9BUA3 381 aaPredicted RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 PLVAPQ9BX97 442 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 LRRC27Q9C0I9 530 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 POLR3FQ9H1D9 316 aaPredicted RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 UBN1Q9NPG3 1134 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 BMP2KQ9NSY1 1161 aaPredicted RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 PRMT7Q9NVM4 692 aaPredicted RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 LMCD1Q9NZU5 365 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 WRAP73Q9P2S5 460 aaPredicted RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 STK17AQ9UEE5 414 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 STK39Q9UEW8 545 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 RBM19Q9Y4C8 960 aaKnown RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 SRPRBQ9Y5M8 271 aaKnown RBP8.64□□□□□ -1.03
SKP2-203ENST00000504386 COL4A6Q14031 1691 aa8.64□□□□□ -1.03
SKP2-203ENST00000504386 ADGRA3Q8IWK6 1321 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 CNTNAP2Q9UHC6 1331 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 A0A0U1RQF3 1178 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 FSD2A1L4K1 749 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 TMEM150BA6NC51 233 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 LRRIQ4A6NIV6 560 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 GRXCR1A8MXD5 290 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 C9IYK1 514 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 INO80B-WBP1J3KQ70 363 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 PPP6R2O75170 966 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 DGKIO75912 1065 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 UPP2O95045 317 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 F13A1P00488 732 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 SRGAP2CP0DJJ0 459 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 FOSL2P15408 326 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 GUCY2CP25092 1073 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 ARL2P36404 184 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 NASPP49321 788 aaPredicted RBP8.63□□□□□ -1.03
SKP2-203ENST00000504386 RABGGTBP53611 331 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 PTENP60484 403 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 ERVK-21P61565 698 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 FAM189BP81408 668 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 BTG3Q14201 252 aaPredicted RBP8.63□□□□□ -1.03
SKP2-203ENST00000504386 BMS1Q14692 1282 aaKnown RBP8.63□□□□□ -1.03
SKP2-203ENST00000504386 ZRSR1Q15695 479 aaKnown RBP8.63□□□□□ -1.03
SKP2-203ENST00000504386 MAPK6Q16659 721 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 TMEM132AQ24JP5 1023 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 NOTUMQ6P988 496 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.63□□□□□ -1.03
SKP2-203ENST00000504386 CCDC73Q6ZRK6 1079 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 LRRC43Q8N309 656 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 ZNF579Q8NAF0 562 aaKnown RBP8.63□□□□□ -1.03
SKP2-203ENST00000504386 TMEM40Q8WWA1 233 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 PPP2R3CQ969Q6 453 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 PPP1R16BQ96T49 567 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 ADPGKQ9BRR6 497 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 TRIM6Q9C030 488 aaPredicted RBP8.63□□□□□ -1.03
SKP2-203ENST00000504386 CCSER1Q9C0I3 900 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 IFT122Q9HBG6 1241 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 AGPAT5Q9NUQ2 364 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 LARSQ9P2J5 1176 aaKnown RBP8.63□□□□□ -1.03
SKP2-203ENST00000504386 ODF2LQ9ULJ1 636 aa8.63□□□□□ -1.03
SKP2-203ENST00000504386 PIN4Q9Y237 131 aaKnown RBP8.63□□□□□ -1.03
SKP2-203ENST00000504386 ZMYM2Q9UBW7 1377 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 SPTLC2O15270 562 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 ZNF623O75123 536 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 SSBP05455 408 aaKnown RBP eCLIP8.62□□□□□ -1.03
SKP2-203ENST00000504386 KRT18P05783 430 aaKnown RBP8.62□□□□□ -1.03
SKP2-203ENST00000504386 LAG3P18627 525 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 PPM1AP35813 382 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 PBX2P40425 430 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms