RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 CPLX1O14810 134 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 CDKL5O76039 1030 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 ATP4AP20648 1035 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 MARK3P27448 753 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 ZNF76P36508 570 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 ERVK-21P61565 698 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 MRPS6P82932 125 aaKnown RBP10.03□□□□□ -0.8
SSBP2-202ENST00000504136 LPIN1Q14693 890 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 FBXO47Q5MNV8 452 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.03□□□□□ -0.8
SSBP2-202ENST00000504136 TSHZ1Q6ZSZ6 1077 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 RSPH3Q86UC2 560 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 BLIDQ8IZY5 108 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 NME8Q8N427 588 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 SLC5A5Q92911 643 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 TOP1MTQ969P6 601 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 ZNF577Q9BSK1 485 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 PHF20Q9BVI0 1012 aa10.03□□□□□ -0.8
SSBP2-202ENST00000504136 IFIH1Q9BYX4 1025 aaKnown RBP10.03□□□□□ -0.8
SSBP2-202ENST00000504136 RC3H2Q9HBD1 1191 aaKnown RBP10.03□□□□□ -0.8
SSBP2-202ENST00000504136 NLRC5Q86WI3 1866 aa10.02□□□□□ -0.8
SSBP2-202ENST00000504136 LINC01553A4QN01 128 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 MSH4O15457 936 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 LPXNO60711 386 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 PSMD10O75832 226 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 CTDNEP1O95476 244 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 AMHP03971 560 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 CTSHP09668 335 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 SNRPBP14678 240 aaKnown RBP10.02□□□□□ -0.81
SSBP2-202ENST00000504136 AK2P54819 239 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 NLRP5P59047 1200 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 PRR16Q569H4 304 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 ZNF484Q5JVG2 852 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 FAM160B1Q5W0V3 765 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 MIS18BP1Q6P0N0 1132 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 MTHFD1LQ6UB35 978 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 LINC01465Q8N7H1 131 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 TBCKQ8TEA7 893 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 DNAJB3Q8WWF6 145 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 CYLDQ9NQC7 956 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 ZNF302Q9NR11 478 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 LMCD1Q9NZU5 365 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 INSL6Q9Y581 213 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 PCDHA10Q9Y5I2 948 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 MTCH2Q9Y6C9 303 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 CDY2AQ9Y6F7 541 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 A0A0C4DFX4 3053 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 EVPLQ92817 2033 aa10.02□□□□□ -0.81
SSBP2-202ENST00000504136 PRRC2BQ5JSZ5 2229 aaKnown RBP10.01□□□□□ -0.81
SSBP2-202ENST00000504136 WDR64B1ANS9 1081 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 ZNF862O60290 1169 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 ADH1AP07327 375 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 PSAPP07602 524 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 LINC00271P0C7V0 271 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 SFNP31947 248 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 SCTRP47872 440 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 IER5Q5VY09 327 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 KRT25Q7Z3Z0 450 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 SPRED2Q7Z698 418 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 ETNPPLQ8TBG4 499 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 GTF3C6Q969F1 213 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 FAM167AQ96KS9 214 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 AIFM3Q96NN9 605 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 SAMD11Q96NU1 681 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 TGS1Q96RS0 853 aaKnown RBP10.01□□□□□ -0.81
SSBP2-202ENST00000504136 SLKQ9H2G2 1235 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-202ENST00000504136 PCDHB11Q9Y5F2 797 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 GTF3C3Q9Y5Q9 886 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 TRPV2Q9Y5S1 764 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 REV3LO60673 3130 aa10.01□□□□□ -0.81
SSBP2-202ENST00000504136 CUL9Q8IWT3 2517 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 ATG2AQ2TAZ0 1938 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 PPFIA3O75145 1194 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 C22orf31O95567 290 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 GHRP10912 638 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 FDPSP14324 419 aaKnown RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 GCFC2P16383 781 aaKnown RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 JAK3P52333 1124 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 STK3Q13188 491 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 NONOQ15233 471 aaKnown RBP eCLIP10□□□□□ -0.81
SSBP2-202ENST00000504136 TARBP2Q15633 366 aaKnown RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 ME3Q16798 604 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 LCE2AQ5TA79 106 aaPredicted RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 PPP4R3AQ6IN85 833 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 SWSAP1Q6NVH7 229 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 TMCO2Q7Z6W1 182 aaPredicted RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 KIAA0319LQ8IZA0 1049 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 TRAPPC12Q8WVT3 735 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 ATXN2LQ8WWM7 1075 aaKnown RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 LINC01599Q8WXQ3 324 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 TNFRSF25Q93038 417 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 ZNF689Q96CS4 500 aaPredicted RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 FTHL17Q9BXU8 183 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 CELF4Q9BZC1 486 aaKnown RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 AGO3Q9H9G7 860 aaKnown RBP10□□□□□ -0.81
SSBP2-202ENST00000504136 KCNMB3Q9NPA1 279 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
SSBP2-202ENST00000504136 SPTBN5Q9NRC6 3674 aaKnown RBP9.99□□□□□ -0.81
SSBP2-202ENST00000504136 C5orf67F2Z3F1 127 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms