RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PITHD1Q9GZP4 211 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P3-201ENST00000502802 BCAS3Q9H6U6 928 aa6.67□□□□□ -1.34
HMGB1P3-201ENST00000502802 NGRNQ9NPE2 291 aaKnown RBP6.67□□□□□ -1.34
HMGB1P3-201ENST00000502802 KLHL11Q9NVR0 708 aa6.67□□□□□ -1.34
HMGB1P3-201ENST00000502802 FTSJ1Q9UET6 329 aa6.67□□□□□ -1.34
HMGB1P3-201ENST00000502802 LIMCH1Q9UPQ0 1083 aa6.67□□□□□ -1.34
HMGB1P3-201ENST00000502802 DAAM1Q9Y4D1 1078 aa6.67□□□□□ -1.34
HMGB1P3-201ENST00000502802 PCDHB6Q9Y5E3 794 aa6.67□□□□□ -1.34
HMGB1P3-201ENST00000502802 UBXN7O94888 489 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 EDNRBP24530 442 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 APEX1P27695 318 aaKnown RBP6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 PDE6BP35913 854 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 STAT5AP42229 794 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 WASP42768 502 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 FAM193AP78312 1265 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 NKX3-2P78367 333 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 CR1LQ2VPA4 569 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 PLEKHN1Q494U1 663 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 CCDC178Q5BJE1 867 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 VASNQ6EMK4 673 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 TP53INP2Q8IXH6 220 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 MARCH10Q8NA82 808 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 PARD3BQ8TEW8 1205 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 ALG3Q92685 438 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 GJA10Q969M2 543 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 DDX11Q96FC9 970 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 TNIP3Q96KP6 325 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 NOL10Q9BSC4 688 aaKnown RBP6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 BTBD2Q9BX70 525 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 NAA15Q9BXJ9 866 aaKnown RBP6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 KLHL14Q9P2G3 628 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 EVLQ9UI08 416 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 WASF3Q9UPY6 502 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 IPPQ9Y573 584 aa6.66□□□□□ -1.34
HMGB1P3-201ENST00000502802 A0A0A6YYJ9 748 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 B3GALT2O43825 422 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 FURINP09958 794 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 XPAP23025 273 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 SERPINB3P29508 390 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 AK2P54819 239 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 NFATC3Q12968 1075 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 ZRSR2Q15696 482 aaKnown RBP6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 MUM1L1Q5H9M0 696 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 BTNL9Q6UXG8 535 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 LIPIQ6XZB0 460 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 TOGARAM2Q6ZUX3 1019 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 KIAA0319LQ8IZA0 1049 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 WDR48Q8TAF3 677 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 INTS4Q96HW7 963 aaKnown RBP6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 OR10A5Q9H207 317 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 KCMF1Q9P0J7 381 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 RBPJLQ9UBG7 517 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 PUF60Q9UHX1 559 aaKnown RBP6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 SCOCQ9UIL1 159 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 INTUQ9ULD6 942 aa6.65□□□□□ -1.34
HMGB1P3-201ENST00000502802 CUTAO60888 179 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 ALDH2P05091 517 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 MYL3P08590 195 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 SLC5A1P13866 664 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 MCAMP43121 646 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 AFMP43652 599 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 KIAA0753Q2KHM9 967 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 ZNF792Q3KQV3 632 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 C4orf46Q504U0 113 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 DARS2Q6PI48 645 aaKnown RBP6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 KLHDC10Q6PID8 442 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 NPNTQ6UXI9 565 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 GAREM2Q75VX8 874 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 ZC3H18Q86VM9 953 aaKnown RBP6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 HDAC10Q969S8 669 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 HIST1H2AHQ96KK5 128 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 HIST1H2AJQ99878 128 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 ADI1Q9BV57 179 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 B3GNT5Q9BYG0 378 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 SLC6A17Q9H1V8 727 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 GREM2Q9H772 168 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 NLRC4Q9NPP4 1024 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 L1RE1Q9UN81 338 aa6.64□□□□□ -1.35
HMGB1P3-201ENST00000502802 OR14I1A6ND48 311 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 ABLIM1O14639 778 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 NRP2O60462 931 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 PQBP1O60828 265 aaKnown RBP6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 WNT11O96014 354 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 FOSP01100 380 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 IGHA1P01876 353 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 GSPT1P15170 499 aaKnown RBP6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 HTR1BP28222 390 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 SEMA5AQ13591 1074 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 SKIDA1Q1XH10 827 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 C3orf36Q3SXR2 165 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 ANO6Q4KMQ2 910 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 TMC5Q6UXY8 1006 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 CD300LDQ6UXZ3 194 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 BMP8AQ7Z5Y6 402 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 SRLQ86TD4 932 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 FAM186BQ8IYM0 893 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 ENAHQ8N8S7 591 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 PAWRQ96IZ0 340 aaKnown RBP6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 CGRRF1Q99675 332 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 MYD88Q99836 296 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms