RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 LIMD1Q9UGP4 676 aa16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 MTCL1Q9Y4B5 1905 aaKnown RBP16.56■□□□□ 0.24
SEC61A1-207ENST00000498837 WDR64B1ANS9 1081 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 PROB1E7EW31 1015 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 EPCAMP16422 314 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 CIITAP33076 1130 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 ALDH7A1P49419 539 aaKnown RBP16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 PRKCEQ02156 737 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 DRP2Q13474 957 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 TMEM173Q86WV6 379 aaPredicted RBP16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 VPS52Q8N1B4 723 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 NLRP7Q8WX94 980 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 TMEM169Q96HH4 297 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 ZBP1Q9H171 429 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 DOCK8Q8NF50 2099 aa16.55■□□□□ 0.24
SEC61A1-207ENST00000498837 DOCK6Q96HP0 2047 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 MSH4O15457 936 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 CPA1P15085 419 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 KIAA1841Q6NSI8 718 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 ZNF710Q8N1W2 664 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 LPPQ93052 612 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 GJA10Q969M2 543 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 MRPL9Q9BYD2 267 aaKnown RBP16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 DACT1Q9NYF0 836 aa16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 TDRD15B5MCY1 1934 aaKnown RBP16.54■□□□□ 0.24
SEC61A1-207ENST00000498837 GVINP1Q7Z2Y8 2422 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 MEIS3P2A8K0S8 358 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 CHMP2AO43633 222 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 PHKA2P46019 1235 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 RCAN1P53805 252 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 TBC1D8BQ0IIM8 1120 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 TARBP2Q15633 366 aaKnown RBP16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 ATAT1Q5SQI0 421 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 ASTLQ6HA08 431 aaPredicted RBP16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 ZDHHC14Q8IZN3 488 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 TDRD5Q8NAT2 981 aaKnown RBP16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 SLC22A17Q8WUG5 538 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 BCL7CQ8WUZ0 217 aaPredicted RBP16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 NRDE2Q9H7Z3 1164 aa16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 DBR1Q9UK59 544 aaKnown RBP16.53■□□□□ 0.24
SEC61A1-207ENST00000498837 A0A087WZ62 844 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 TMEM150BA6NC51 233 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 PRR23AA6NEV1 266 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 PRPF3O43395 683 aaKnown RBP16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 CTSAP10619 480 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 GNA11P29992 359 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 NBL1P41271 181 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 TMC5Q6UXY8 1006 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 DDX53Q86TM3 631 aaKnown RBP16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 TMEM87AQ8NBN3 555 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 PHKBQ93100 1093 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 IGSF21Q96ID5 467 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 CEP89Q96ST8 783 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 SH2D3AQ9BRG2 576 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 FDXACB1Q9BRP7 624 aaPredicted RBP16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 GCOM2Q9BZD3 368 aaPredicted RBP16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 UNC45AQ9H3U1 944 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 DZANK1Q9NVP4 752 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 IRAK3Q9Y616 596 aa16.52■□□□□ 0.24
SEC61A1-207ENST00000498837 ZNF292O60281 2723 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 GAS7O60861 476 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 GALTP07902 379 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 MTERF2Q49AM1 385 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 TWF2Q6IBS0 349 aaKnown RBP16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 SKAP1Q86WV1 359 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 PLCD3Q8N3E9 789 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 SLC5A5Q92911 643 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 VN1R3Q9BXE9 311 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 MFSD1Q9H3U5 465 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 CHST12Q9NRB3 414 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 TBC1D13Q9NVG8 400 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 DNAJB4Q9UDY4 337 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 USTQ9Y2C2 406 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 INPP5FQ9Y2H2 1132 aa16.51■□□□□ 0.23
SEC61A1-207ENST00000498837 EP300Q09472 2414 aaPredicted RBP16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 DCHS1Q96JQ0 3298 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 B4GALT3O60512 393 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 STBD1O95210 358 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 SFNP31947 248 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 JAK3P52333 1124 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 POLGP54098 1239 aaPredicted RBP16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 FGD1P98174 961 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 NOMO2Q5JPE7 1267 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 LRCH2Q5VUJ6 765 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 Q6ZUG5 572 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 FRMD5Q7Z6J6 570 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 BRF1Q92994 677 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 RIT2Q99578 217 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 TRAIPQ9BWF2 469 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 NIFKQ9BYG3 293 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms