RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 EMILIN2Q9BXX0 1053 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 LRRC2Q9BYS8 371 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 SEMA4AQ9H3S1 761 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 KCNK12Q9HB15 430 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 GABBR1Q9UBS5 961 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 CA14Q9ULX7 337 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.29
CDK9-205ENST00000498339 FANCMQ8IYD8 2048 aa13.21□□□□□ -0.29
CDK9-205ENST00000498339 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 A0A0U1RQF3 1178 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 CHMLP26374 656 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 GBP2P32456 591 aaPredicted RBP13.2□□□□□ -0.3
CDK9-205ENST00000498339 SREBF1P36956 1147 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 NONOQ15233 471 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDK9-205ENST00000498339 LETM2Q2VYF4 491 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 ZC3H14Q6PJT7 736 aaKnown RBP13.2□□□□□ -0.3
CDK9-205ENST00000498339 NIPA1Q7RTP0 329 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 GPR149Q86SP6 731 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 SLC22A17Q8WUG5 538 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 FAM167AQ96KS9 214 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 ADAMTS10Q9H324 1103 aa13.2□□□□□ -0.3
CDK9-205ENST00000498339 MAFBQ9Y5Q3 323 aaPredicted RBP13.2□□□□□ -0.3
CDK9-205ENST00000498339 CARNS1A5YM72 827 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 SMCO2A6NFE2 343 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 FAM86B1E9PN63 330 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 CSDE1O75534 798 aaKnown RBP13.19□□□□□ -0.3
CDK9-205ENST00000498339 FAM86B2P0C5J1 330 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
CDK9-205ENST00000498339 LIFRP42702 1097 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 GPC3P51654 580 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
CDK9-205ENST00000498339 AAMPQ13685 434 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 PUM1Q14671 1186 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDK9-205ENST00000498339 PTPN14Q15678 1187 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
CDK9-205ENST00000498339 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 ZNF746Q6NUN9 644 aaPredicted RBP13.19□□□□□ -0.3
CDK9-205ENST00000498339 GLB1LQ6UWU2 654 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 DDX53Q86TM3 631 aaKnown RBP13.19□□□□□ -0.3
CDK9-205ENST00000498339 ZNF598Q86UK7 904 aaKnown RBP13.19□□□□□ -0.3
CDK9-205ENST00000498339 SMAP1Q8IYB5 467 aaPredicted RBP13.19□□□□□ -0.3
CDK9-205ENST00000498339 LPPQ93052 612 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 IGSF21Q96ID5 467 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 IGSF9Q9P2J2 1179 aa13.19□□□□□ -0.3
CDK9-205ENST00000498339 MYH15Q9Y2K3 1946 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 ZNF292O60281 2723 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 DOCK8Q8NF50 2099 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 OATP04181 439 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 TBC1D8BQ0IIM8 1120 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 ZNF710Q8N1W2 664 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 BCL7CQ8WUZ0 217 aaPredicted RBP13.18□□□□□ -0.3
CDK9-205ENST00000498339 RSAD2Q8WXG1 361 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 STAMQ92783 540 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 TBC1D17Q9HA65 648 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 MAN1C1Q9NR34 630 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 TBC1D22BQ9NU19 505 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 TBC1D13Q9NVG8 400 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
CDK9-205ENST00000498339 PIN4Q9Y237 131 aaKnown RBP13.18□□□□□ -0.3
CDK9-205ENST00000498339 PCDHA10Q9Y5I2 948 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
CDK9-205ENST00000498339 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
CDK9-205ENST00000498339 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
CDK9-205ENST00000498339 EP300Q09472 2414 aaPredicted RBP13.17□□□□□ -0.3
CDK9-205ENST00000498339 KRBA1A5PL33 1030 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 C2CD2LO14523 706 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 DHX15O43143 795 aaKnown RBP13.17□□□□□ -0.3
CDK9-205ENST00000498339 SGSM2O43147 1006 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 DCNP07585 359 aaKnown RBP13.17□□□□□ -0.3
CDK9-205ENST00000498339 GALTP07902 379 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 MYBP10242 640 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 SKIP12755 728 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDK9-205ENST00000498339 PHKA2P46019 1235 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 CLCN4P51793 760 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 PRKCEQ02156 737 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 NOMO2Q5JPE7 1267 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 C15orf39Q6ZRI6 1047 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 RSPH1Q8WYR4 309 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 RUBCNQ92622 972 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 GCOM2Q9BZD3 368 aaPredicted RBP13.17□□□□□ -0.3
CDK9-205ENST00000498339 MRPL17Q9NRX2 175 aaKnown RBP13.17□□□□□ -0.3
CDK9-205ENST00000498339 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 WNT16Q9UBV4 365 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 DNAJB4Q9UDY4 337 aa13.17□□□□□ -0.3
CDK9-205ENST00000498339 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 WDR64B1ANS9 1081 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 hCG_1984214I3L0E3 225 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 CHMP2AO43633 222 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 CNPP09543 421 aaKnown RBP13.16□□□□□ -0.3
CDK9-205ENST00000498339 SLC11A1P49279 550 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 CLK2P49760 499 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms