RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 UBE4AQ14139 1066 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 TBC1D10BQ4KMP7 808 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-208ENST00000497026 ZNF385BQ569K4 471 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 STRIP1Q5VSL9 837 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 DLK2Q6UY11 383 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 RGS22Q8NE09 1264 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 AGBL3Q8NEM8 1001 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 KLHL6Q8WZ60 621 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 ANAPC16Q96DE5 110 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 FAM84BQ96KN1 310 aaPredicted RBP5.96□□□□□ -1.46
CSMD3-208ENST00000497026 SIGLEC10Q96LC7 697 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 PTCHD1Q96NR3 888 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 KLHL25Q9H0H3 589 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 RXFP1Q9HBX9 757 aa5.96□□□□□ -1.46
CSMD3-208ENST00000497026 A0A1W2PQJ5 194 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 H7C1D1 291 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 N4BP3O15049 544 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 RBM10P98175 930 aaKnown RBP5.95□□□□□ -1.46
CSMD3-208ENST00000497026 METTL24Q5JXM2 366 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 BICRALQ6AI39 1079 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 TTLL5Q6EMB2 1281 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 TTLL10Q6ZVT0 673 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 TDRD7Q8NHU6 1098 aaKnown RBP5.95□□□□□ -1.46
CSMD3-208ENST00000497026 MZB1Q8WU39 189 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 SPATA32Q96LK8 384 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 GLIS2Q9BZE0 524 aaPredicted RBP5.95□□□□□ -1.46
CSMD3-208ENST00000497026 SIL1Q9H173 461 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 CCSER2Q9H7U1 834 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 EPB41L4AQ9HCS5 686 aaPredicted RBP5.95□□□□□ -1.46
CSMD3-208ENST00000497026 WHRNQ9P202 907 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 PLA2G2DQ9UNK4 145 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 JAG2Q9Y219 1238 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 SUGT1Q9Y2Z0 365 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 MYO3BQ8WXR4 1341 aa5.95□□□□□ -1.46
CSMD3-208ENST00000497026 A0A0U1RQG5 324 aaPredicted RBP5.94□□□□□ -1.46
CSMD3-208ENST00000497026 HRKO00198 91 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 RFXAPO00287 272 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 ABLIM1O14639 778 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 SRGAP3O43295 1099 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 CIAO1O76071 339 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 GNAI2P04899 355 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 HIBADHP31937 336 aaKnown RBP5.94□□□□□ -1.46
CSMD3-208ENST00000497026 ZNF200P98182 395 aaPredicted RBP5.94□□□□□ -1.46
CSMD3-208ENST00000497026 PUM3Q15397 648 aaKnown RBP5.94□□□□□ -1.46
CSMD3-208ENST00000497026 CST9Q5W186 159 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 KIAA1211LQ6NV74 962 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 ZNF804AQ7Z570 1209 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 ITPRIPQ8IWB1 547 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 FTSJ3Q8IY81 847 aaKnown RBP5.94□□□□□ -1.46
CSMD3-208ENST00000497026 TMEFF1Q8IYR6 380 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 ZBED3Q96IU2 234 aaPredicted RBP5.94□□□□□ -1.46
CSMD3-208ENST00000497026 MAP7D2Q96T17 732 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 GBP3Q9H0R5 595 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 MYOZ2Q9NPC6 264 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 GGA3Q9NZ52 723 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 CGGBP1Q9UFW8 167 aaPredicted RBP5.94□□□□□ -1.46
CSMD3-208ENST00000497026 SUSD2Q9UGT4 822 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 RCAN3Q9UKA8 241 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 DIS3Q9Y2L1 958 aaKnown RBP5.94□□□□□ -1.46
CSMD3-208ENST00000497026 PCDHAC2Q9Y5I4 1007 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 SLC12A7Q9Y666 1083 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 AOX1Q06278 1338 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 FAM205AQ6ZU69 1335 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 CNTNAP1P78357 1384 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 CEP350Q5VT06 3117 aa5.94□□□□□ -1.46
CSMD3-208ENST00000497026 ADM5C9JUS6 153 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 WNT10BO00744 389 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 PPM1BO75688 479 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 SASH1O94885 1247 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 TBC1D8O95759 1140 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 IL15P40933 162 aaPredicted RBP5.93□□□□□ -1.46
CSMD3-208ENST00000497026 FKBP1AP62942 108 aaKnown RBP5.93□□□□□ -1.46
CSMD3-208ENST00000497026 PLEKHN1Q494U1 663 aaPredicted RBP5.93□□□□□ -1.46
CSMD3-208ENST00000497026 C20orf194Q5TEA3 1177 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 TCERG1LQ5VWI1 586 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 OLFML2BQ68BL8 750 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 VHLLQ6RSH7 139 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 CYP2R1Q6VVX0 501 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 CPNE8Q86YQ8 564 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 IGDCC3Q8IVU1 814 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 JMYQ8N9B5 988 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 C19orf47Q8N9M1 422 aaKnown RBP5.93□□□□□ -1.46
CSMD3-208ENST00000497026 OR6P1Q8NGX9 317 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 SSH3Q8TE77 659 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 LPIN2Q92539 896 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 LGR4Q9BXB1 951 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 TGIF2Q9GZN2 237 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 PDCL3Q9H2J4 239 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 APEX2Q9UBZ4 518 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 SCAF8Q9UPN6 1271 aaKnown RBP5.93□□□□□ -1.46
CSMD3-208ENST00000497026 HDAC5Q9UQL6 1122 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 MRVI1Q9Y6F6 885 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 AKAP11Q9UKA4 1901 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 PAPPA2Q9BXP8 1791 aa5.93□□□□□ -1.46
CSMD3-208ENST00000497026 ZC3H12DA2A288 527 aaKnown RBP5.92□□□□□ -1.46
CSMD3-208ENST00000497026 RASSF10A6NK89 507 aa5.92□□□□□ -1.46
CSMD3-208ENST00000497026 AURKAO14965 403 aa5.92□□□□□ -1.46
CSMD3-208ENST00000497026 DBHP09172 617 aa5.92□□□□□ -1.46
CSMD3-208ENST00000497026 ADORA1P30542 326 aa5.92□□□□□ -1.46
CSMD3-208ENST00000497026 L1CAMP32004 1257 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms