RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 TMEM161BQ8NDZ6 487 aa18.56■□□□□ 0.56
LMNA-216ENST00000496738 THSD7BQ9C0I4 1608 aa18.56■□□□□ 0.56
LMNA-216ENST00000496738 UBE4BO95155 1302 aa18.56■□□□□ 0.56
LMNA-216ENST00000496738 DENND3A2RUS2 1198 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 A6NJR5 290 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 NR3C1P04150 777 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 MAPTP10636 758 aaKnown RBP18.55■□□□□ 0.56
LMNA-216ENST00000496738 CACNB2Q08289 660 aaPredicted RBP18.55■□□□□ 0.56
LMNA-216ENST00000496738 IRF5Q13568 498 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 NR1I3Q14994 352 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 EDRF1Q3B7T1 1238 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 CTAGE1Q96RT6 745 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 TUBGCP2Q9BSJ2 902 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 AP5M1Q9H0R1 490 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 SRRDQ9UH36 339 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 LRRIQ4A6NIV6 560 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 ARL2P36404 184 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 MKRN4PQ13434 485 aaPredicted RBP18.55■□□□□ 0.56
LMNA-216ENST00000496738 CCDC40Q4G0X9 1142 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 FILIP1LQ4L180 1135 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 CCDC186Q7Z3E2 898 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 METTL13Q8N6R0 699 aa18.55■□□□□ 0.56
LMNA-216ENST00000496738 ZNF668Q96K58 619 aaPredicted RBP18.55■□□□□ 0.56
LMNA-216ENST00000496738 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
LMNA-216ENST00000496738 TPM3P06753 285 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 GJB1P08034 283 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 MYL3P08590 195 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 HOXD8P13378 290 aaPredicted RBP18.54■□□□□ 0.56
LMNA-216ENST00000496738 CLCN3P51790 818 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 GTF2BQ00403 316 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 ZNF296Q8WUU4 475 aaPredicted RBP18.54■□□□□ 0.56
LMNA-216ENST00000496738 ACCSQ96QU6 501 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 GBP3Q9H0R5 595 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 C17orf75Q9HAS0 396 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 MYADML2A6NDP7 307 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 CCND3P30281 292 aaPredicted RBP18.54■□□□□ 0.56
LMNA-216ENST00000496738 RTP1P59025 263 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 CEP135Q66GS9 1140 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 VSTM4Q8IW00 320 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 SPIRE2Q8WWL2 714 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 PRPF31Q8WWY3 499 aaKnown RBP18.54■□□□□ 0.56
LMNA-216ENST00000496738 AGPAT3Q9NRZ7 376 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 TBX20Q9UMR3 447 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 USP20Q9Y2K6 914 aa18.54■□□□□ 0.56
LMNA-216ENST00000496738 LRRC10BA6NIK2 292 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 CETN3O15182 167 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 C22orf31O95567 290 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 C6orf222P0C671 652 aaPredicted RBP18.53■□□□□ 0.56
LMNA-216ENST00000496738 PRKAR2AP13861 404 aaKnown RBP18.53■□□□□ 0.56
LMNA-216ENST00000496738 CASP4P49662 377 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 CYP2J2P51589 502 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 ALCAMQ13740 583 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 CAPSQ13938 189 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 ARID5BQ14865 1188 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 HS2ST1Q7LGA3 356 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 NOC4LQ9BVI4 516 aaKnown RBP18.53■□□□□ 0.56
LMNA-216ENST00000496738 ADCY3O60266 1144 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 KLRC1P26715 233 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 EFCAB12Q6NXP0 572 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 FOXR2Q6PJQ5 311 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 DEPTORQ8TB45 409 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 CEP63Q96MT8 703 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 PPP1R16BQ96T49 567 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 NTPCRQ9BSD7 190 aaKnown RBP18.53■□□□□ 0.56
LMNA-216ENST00000496738 ST6GALNAC4Q9H4F1 302 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 PCIF1Q9H4Z3 704 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 PRDM10Q9NQV6 1147 aa18.53■□□□□ 0.56
LMNA-216ENST00000496738 GOLGA6L6A8MZA4 724 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 PGK1P00558 417 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
LMNA-216ENST00000496738 HOXD10P28358 340 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 CPT1AP50416 773 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 UBXN1Q04323 297 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 ZNF484Q5JVG2 852 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 RAET1EQ8TD07 263 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 KAT2BQ92831 832 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 TMEM206Q9H813 350 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 PPME1Q9Y570 386 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 CASP8AP2Q9UKL3 1982 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 CENPFP49454 3210 aa18.52■□□□□ 0.56
LMNA-216ENST00000496738 IGKV6-21A0A0C4DH24 114 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 FKTNO75072 461 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 AKAP3O75969 853 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 SRGAP2CP0DJJ0 459 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 NAMPTP43490 491 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 GOLGA8FQ08AF8 430 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 GOLGA8DPQ0D2H9 430 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 GRIK4Q16099 956 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 FSCN1Q16658 493 aaKnown RBP18.52■□□□□ 0.55
LMNA-216ENST00000496738 KIAA0753Q2KHM9 967 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 MIIPQ5JXC2 388 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 TAS1R3Q7RTX0 852 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 RHPN2Q8IUC4 686 aa18.52■□□□□ 0.55
LMNA-216ENST00000496738 ZC3H3Q8IXZ2 948 aaKnown RBP18.52■□□□□ 0.55
LMNA-216ENST00000496738 SUCLA2Q9P2R7 463 aaPredicted RBP18.52■□□□□ 0.55
LMNA-216ENST00000496738 LAMTOR4Q0VGL1 99 aa18.51■□□□□ 0.55
LMNA-216ENST00000496738 IER5Q5VY09 327 aa18.51■□□□□ 0.55
LMNA-216ENST00000496738 SLC17A8Q8NDX2 589 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms