RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SMC1BQ8NDV3 1235 aa5.4□□□□□ -1.54
CD46-218ENST00000496723 NEU4Q8WWR8 484 aaPredicted RBP5.4□□□□□ -1.54
CD46-218ENST00000496723 MAPRE3Q9UPY8 281 aa5.4□□□□□ -1.54
CD46-218ENST00000496723 A0A0G2JNJ9 132 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 CYP27B1O15528 508 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 MSX2P35548 267 aaPredicted RBP5.39□□□□□ -1.55
CD46-218ENST00000496723 RGS3P49796 1198 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 MEOX1P50221 254 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 IL2P60568 153 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 ROM1Q03395 351 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 TTC38Q5R3I4 469 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 GRAMD4Q6IC98 578 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 LARP4Q71RC2 724 aaKnown RBP eCLIP5.39□□□□□ -1.55
CD46-218ENST00000496723 THNSL2Q86YJ6 484 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 PASD1Q8IV76 773 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 THEMISQ8N1K5 641 aaPredicted RBP5.39□□□□□ -1.55
CD46-218ENST00000496723 EFHBQ8N7U6 833 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 UBR7Q8N806 425 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 ZNF483Q8TF39 744 aaPredicted RBP5.39□□□□□ -1.55
CD46-218ENST00000496723 RTF1Q92541 710 aaKnown RBP5.39□□□□□ -1.55
CD46-218ENST00000496723 MAML3Q96JK9 1138 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 TUBGCP5Q96RT8 1024 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 KIAA1683Q9H0B3 1180 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 TLR9Q9NR96 1032 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 SPTLC3Q9NUV7 552 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 Q9UFV3 132 aa5.39□□□□□ -1.55
CD46-218ENST00000496723 TGM5O43548 720 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 FKBP9O95302 570 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 PEX11BO96011 259 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 ADCYAP1R1P41586 468 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 MASP1P48740 699 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 MRE11P49959 708 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 OCRLQ01968 901 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 MAP3K12Q12852 859 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 GRM7Q14831 915 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 PCOLCEQ15113 449 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 FNDC7Q5VTL7 733 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 PRAMEF9Q5VWM5 478 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 TMEM200BQ69YZ2 307 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 SLFN12LQ6IEE8 588 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 FKBP9P1Q75LS8 142 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 RNF180Q86T96 592 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 SGMS1Q86VZ5 419 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 ZZZ3Q8IYH5 903 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 PRRX2Q99811 253 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 ZMAT4Q9H898 229 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 PARPBPQ9NWS1 579 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 GIT1Q9Y2X7 761 aa5.38□□□□□ -1.55
CD46-218ENST00000496723 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 SLC26A4O43511 780 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 APOL3O95236 402 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 STAT3P40763 770 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 LSSP48449 732 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 SMAD3P84022 425 aaKnown RBP5.37□□□□□ -1.55
CD46-218ENST00000496723 HGFACQ04756 655 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 ADCY1Q08828 1119 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 EGFLAMQ63HQ2 1017 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 DDX46Q7L014 1031 aaKnown RBP5.37□□□□□ -1.55
CD46-218ENST00000496723 MRGPRGQ86SM5 289 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 LDLRAD3Q86YD5 345 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 PHYKPLQ8IUZ5 450 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 GPR135Q8IZ08 494 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 RTKN2Q8IZC4 609 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 C7orf31Q8N865 590 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 USP7Q93009 1102 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 MPHOSPH9Q99550 1183 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 MMRN2Q9H8L6 949 aa5.37□□□□□ -1.55
CD46-218ENST00000496723 PPFIA2O75334 1257 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 CD40P25942 277 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 STAT5BP51692 787 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 NANOS3P60323 173 aaKnown RBP5.36□□□□□ -1.55
CD46-218ENST00000496723 STRN3Q13033 797 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 LRRC32Q14392 662 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 MYBPC3Q14896 1274 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 DHCR24Q15392 516 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 TIGD7Q6NT04 549 aaPredicted RBP5.36□□□□□ -1.55
CD46-218ENST00000496723 FILIP1Q7Z7B0 1213 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 C11orf74Q86VG3 221 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 TMPRSS6Q8IU80 811 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 CHAC2Q8WUX2 184 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 LARP4BQ92615 738 aaKnown RBP5.36□□□□□ -1.55
CD46-218ENST00000496723 POFUT1Q9H488 388 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 CAAP1Q9H8G2 361 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 EMC7Q9NPA0 242 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 CEP72Q9P209 647 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 MAGEL2Q9UJ55 1249 aa5.36□□□□□ -1.55
CD46-218ENST00000496723 MAFO75444 373 aaPredicted RBP5.35□□□□□ -1.55
CD46-218ENST00000496723 PRPF6O94906 941 aaKnown RBP5.35□□□□□ -1.55
CD46-218ENST00000496723 SOX5P35711 763 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 ADCY2Q08462 1091 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 ATP13A4Q4VNC1 1196 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 CT47A1Q5JQC4 288 aaPredicted RBP5.35□□□□□ -1.55
CD46-218ENST00000496723 STRA8Q7Z7C7 330 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 DNAJC10Q8IXB1 793 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 ULK2Q8IYT8 1036 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 BCL6BQ8N143 479 aaPredicted RBP5.35□□□□□ -1.55
CD46-218ENST00000496723 D2HGDHQ8N465 521 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 SHCBP1Q8NEM2 672 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 RPGRQ92834 1020 aaKnown RBP5.35□□□□□ -1.55
CD46-218ENST00000496723 MYL10Q9BUA6 226 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms