RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP39-219ENST00000496047 CYP2W1Q8TAV3 490 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 PIGOQ8TEQ8 1089 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 TBC1D5Q92609 795 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 SYN2Q92777 582 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 GOLGA1Q92805 767 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 ACCSQ96QU6 501 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 RUSC1Q9BVN2 902 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 TTYH3Q9C0H2 523 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 PDCL3Q9H2J4 239 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 NHEJ1Q9H9Q4 299 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 FAM207AQ9NSI2 230 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 PKD2L1Q9P0L9 805 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 SEPT9Q9UHD8 586 aaPredicted RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 MYO6Q9UM54 1294 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 PLAGL2Q9UPG8 496 aa7.58□□□□□ -1.2
USP39-219ENST00000496047 BZW2Q9Y6E2 419 aaKnown RBP7.58□□□□□ -1.2
USP39-219ENST00000496047 CITO14578 2027 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 ASTN2O75129 1339 aaPredicted RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 ANO9A1A5B4 782 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 IQCA1LA6NCM1 817 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 GFRA3O60609 400 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 HIP1RO75146 1068 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 SLC25A27O95847 323 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 NR3C2P08235 984 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 PLS3P13797 630 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 ITGB5P18084 799 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 MCM3P25205 808 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 HNRNPH3P31942 346 aaKnown RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 YWHABP31946 246 aaKnown RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 GJA5P36382 358 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 CTCFP49711 727 aaPredicted RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 VAV2P52735 878 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 ZNF131P52739 623 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 PPATQ06203 517 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 KCNH2Q12809 1159 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 RAPGEF1Q13905 1077 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 BAATQ14032 418 aaPredicted RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 MTF1Q14872 753 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 LAPTM4AQ15012 233 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 STXBP2Q15833 593 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 EXOC3L4Q17RC7 722 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 WHAMMP3Q1A5X7 153 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 XKR9Q5GH70 373 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 C10orf76Q5T2E6 689 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 SWT1Q5T5J6 900 aaKnown RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 PDXDC1Q6P996 788 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 TRIM65Q6PJ69 517 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 B3GNT9Q6UX72 402 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 RRAGAQ7L523 313 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 ERO1BQ86YB8 467 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 ANKRD35Q8N283 1001 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 ACRBPQ8NEB7 543 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 MCPH1Q8NEM0 835 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 TRIM58Q8NG06 486 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 KIFAP3Q92845 792 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 SECISBP2LQ93073 1101 aaKnown RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 RPGRIP1Q96KN7 1286 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 IFT74Q96LB3 600 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 TAAR1Q96RJ0 339 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 SENP7Q9BQF6 1050 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 PRR14Q9BWN1 585 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 IFIH1Q9BYX4 1025 aaKnown RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 C17orf75Q9HAS0 396 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 PLCB1Q9NQ66 1216 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 COL20A1Q9P218 1284 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 GUCA1BQ9UMX6 200 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 SCAF8Q9UPN6 1271 aaKnown RBP7.57□□□□□ -1.2
USP39-219ENST00000496047 SIK3Q9Y2K2 1263 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 AFG3L2Q9Y4W6 797 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 PCDHA10Q9Y5I2 948 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 MRFAP1Q9Y605 127 aa7.57□□□□□ -1.2
USP39-219ENST00000496047 ASTN1O14525 1302 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 ATP8B3O60423 1300 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 ANK1P16157 1881 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 CCDC85CA6NKD9 419 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 LRRC53A6NM62 1247 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 RSPH10B2B2RC85 870 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 CXCL11O14625 94 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 EXOC3O60645 756 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 TUBBP07437 444 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 RSPH10BP0C881 870 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 RARRES1P49788 294 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 KIF11P52732 1056 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 POLR2FP61218 127 aaKnown RBP7.56□□□□□ -1.2
USP39-219ENST00000496047 RBM10P98175 930 aaKnown RBP7.56□□□□□ -1.2
USP39-219ENST00000496047 KLHL30Q0D2K2 578 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 PRKG1Q13976 671 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 VGLL4Q14135 290 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 GLIPR1L2Q4G1C9 344 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 FAM160B1Q5W0V3 765 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 KCNV1Q6PIU1 500 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 INTS8Q75QN2 995 aaKnown RBP7.56□□□□□ -1.2
USP39-219ENST00000496047 FASTKD5Q7L8L6 764 aaKnown RBP7.56□□□□□ -1.2
USP39-219ENST00000496047 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 EXOC8Q8IYI6 725 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 SLC35F6Q8N357 371 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 CCDC155Q8N6L0 562 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 REPS2Q8NFH8 660 aa7.56□□□□□ -1.2
USP39-219ENST00000496047 IL31RAQ8NI17 732 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms