RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 POLR3BQ9NW08 1133 aaPredicted RBP6.35□□□□□ -1.39
SRRM1-219ENST00000495561 TRPS1Q9UHF7 1281 aa6.35□□□□□ -1.39
SRRM1-219ENST00000495561 RCAN3Q9UKA8 241 aa6.35□□□□□ -1.39
SRRM1-219ENST00000495561 RABL3Q5HYI8 236 aa6.34□□□□□ -1.39
SRRM1-219ENST00000495561 C1QL3Q5VWW1 255 aa6.34□□□□□ -1.39
SRRM1-219ENST00000495561 DDX53Q86TM3 631 aaKnown RBP6.34□□□□□ -1.39
SRRM1-219ENST00000495561 THAP3Q8WTV1 239 aaPredicted RBP6.34□□□□□ -1.39
SRRM1-219ENST00000495561 SLC25A43Q8WUT9 341 aaPredicted RBP6.34□□□□□ -1.39
SRRM1-219ENST00000495561 HAS1Q92839 578 aa6.34□□□□□ -1.39
SRRM1-219ENST00000495561 PGBD4Q96DM1 585 aa6.34□□□□□ -1.39
SRRM1-219ENST00000495561 MNTQ99583 582 aa6.34□□□□□ -1.39
SRRM1-219ENST00000495561 HAPLN2Q9GZV7 340 aa6.34□□□□□ -1.39
SRRM1-219ENST00000495561 NCOA5Q9HCD5 579 aaKnown RBP6.34□□□□□ -1.39
SRRM1-219ENST00000495561 ACSS2Q9NR19 701 aa6.34□□□□□ -1.39
SRRM1-219ENST00000495561 DNAI1Q9UI46 699 aa6.34□□□□□ -1.39
SRRM1-219ENST00000495561 GLRX3O76003 335 aaKnown RBP6.33□□□□□ -1.4
SRRM1-219ENST00000495561 PRAMEF9Q5VWM5 478 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 KRT40Q6A162 431 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 MFSD5Q6N075 450 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 ZCCHC8Q6NZY4 707 aaKnown RBP6.33□□□□□ -1.4
SRRM1-219ENST00000495561 RHOUQ7L0Q8 258 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 BMP8AQ7Z5Y6 402 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 MB21D1Q8N884 522 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 ATXN2LQ8WWM7 1075 aaKnown RBP6.33□□□□□ -1.4
SRRM1-219ENST00000495561 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 SRPK1Q96SB4 655 aaKnown RBP6.33□□□□□ -1.4
SRRM1-219ENST00000495561 SAMD15Q9P1V8 674 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 PTCH2Q9Y6C5 1203 aa6.33□□□□□ -1.4
SRRM1-219ENST00000495561 GRXCR1A8MXD5 290 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 JUNP05412 331 aaKnown RBP6.32□□□□□ -1.4
SRRM1-219ENST00000495561 HNRNPLP14866 589 aaKnown RBP eCLIP6.32□□□□□ -1.4
SRRM1-219ENST00000495561 BMP5P22003 454 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 RBL2Q08999 1139 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 MYBPC3Q14896 1274 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 DPY19L2P1Q6NXN4 242 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 ZNF276Q8N554 614 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 MDGA1Q8NFP4 955 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 LENG9Q96B70 501 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 ARMC5Q96C12 935 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 ZNF512Q96ME7 567 aaPredicted RBP6.32□□□□□ -1.4
SRRM1-219ENST00000495561 TUBGCP5Q96RT8 1024 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 PCIF1Q9H4Z3 704 aa6.32□□□□□ -1.4
SRRM1-219ENST00000495561 PTPDC1A2A3K4 754 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 GOLGA6L6A8MZA4 724 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 MFAP3LO75121 409 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 CYP17A1P05093 508 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 PROZP22891 400 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 BCAR1P56945 870 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 C2orf27AQ580R0 203 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 MBNL2Q5VZF2 373 aaKnown RBP6.31□□□□□ -1.4
SRRM1-219ENST00000495561 KIAA1958Q8N8K9 716 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 ARL8AQ96BM9 186 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 NCDNQ9UBB6 729 aa6.31□□□□□ -1.4
SRRM1-219ENST00000495561 B4E1Z4 1266 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 PLD2O14939 933 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 DAPK3O43293 454 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 IPO13O94829 963 aaKnown RBP6.3□□□□□ -1.4
SRRM1-219ENST00000495561 RAPGEF3O95398 923 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 GCP02774 474 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 NR4A1P22736 598 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 PTX3P26022 381 aaPredicted RBP6.3□□□□□ -1.4
SRRM1-219ENST00000495561 KIR2DL3P43628 341 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 SPIDRQ14159 915 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 EPHA7Q15375 998 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 VRK3Q8IV63 474 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 CMTM4Q8IZR5 234 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 GPR150Q8NGU9 434 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 RPGRQ92834 1020 aaKnown RBP6.3□□□□□ -1.4
SRRM1-219ENST00000495561 MKL1Q969V6 931 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 CLUHP3Q96NS8 147 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 MLST8Q9BVC4 326 aa6.3□□□□□ -1.4
SRRM1-219ENST00000495561 C14orf93Q9H972 538 aaKnown RBP6.3□□□□□ -1.4
SRRM1-219ENST00000495561 H7C1D1 291 aa6.29□□□□□ -1.4
SRRM1-219ENST00000495561 STC2O76061 302 aa6.29□□□□□ -1.4
SRRM1-219ENST00000495561 ADRA1BP35368 520 aa6.29□□□□□ -1.4
SRRM1-219ENST00000495561 IGFALSP35858 605 aa6.29□□□□□ -1.4
SRRM1-219ENST00000495561 NPEPPSP55786 919 aa6.29□□□□□ -1.4
SRRM1-219ENST00000495561 NAIF1Q69YI7 327 aaPredicted RBP6.29□□□□□ -1.4
SRRM1-219ENST00000495561 NME9Q86XW9 330 aa6.29□□□□□ -1.4
SRRM1-219ENST00000495561 ST8SIA2Q92186 375 aa6.29□□□□□ -1.4
SRRM1-219ENST00000495561 PITHD1Q9GZP4 211 aaPredicted RBP6.29□□□□□ -1.4
SRRM1-219ENST00000495561 FZD1Q9UP38 647 aa6.29□□□□□ -1.4
SRRM1-219ENST00000495561 E9PSI1 815 aa6.28□□□□□ -1.4
SRRM1-219ENST00000495561 ZNF174Q15697 407 aa6.28□□□□□ -1.4
SRRM1-219ENST00000495561 ESRP1Q6NXG1 681 aaKnown RBP6.28□□□□□ -1.4
SRRM1-219ENST00000495561 KANSL1Q7Z3B3 1105 aa6.28□□□□□ -1.4
SRRM1-219ENST00000495561 SYNE4Q8N205 404 aa6.28□□□□□ -1.4
SRRM1-219ENST00000495561 LILRB2Q8N423 598 aa6.28□□□□□ -1.4
SRRM1-219ENST00000495561 PROKR1Q8TCW9 393 aa6.28□□□□□ -1.4
SRRM1-219ENST00000495561 CABP5Q9NP86 173 aa6.28□□□□□ -1.4
SRRM1-219ENST00000495561 TNFRSF18Q9Y5U5 241 aa6.28□□□□□ -1.4
SRRM1-219ENST00000495561 A0A0A6YYJ9 748 aa6.27□□□□□ -1.41
SRRM1-219ENST00000495561 MTSS1O43312 755 aa6.27□□□□□ -1.41
SRRM1-219ENST00000495561 DNAJC8O75937 253 aaPredicted RBP6.27□□□□□ -1.41
SRRM1-219ENST00000495561 ASLP04424 464 aa6.27□□□□□ -1.41
SRRM1-219ENST00000495561 ITGB1P05556 798 aa6.27□□□□□ -1.41
SRRM1-219ENST00000495561 ADCY2Q08462 1091 aa6.27□□□□□ -1.41
SRRM1-219ENST00000495561 ZNF460Q14592 562 aa6.27□□□□□ -1.41
SRRM1-219ENST00000495561 DCAF17Q5H9S7 520 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms