RNA–Protein interactions for RNA: ENST00000495555.6

IFT27-211, Transcript of intraflagellar transport 27, humanhuman

TSL 2

Gene IFT27, Length 744 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-211ENST00000495555 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 PLA2G4FQ68DD2 849 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 PTCRAQ6ISU1 281 aaPredicted RBP13.55□□□□□ -0.24
IFT27-211ENST00000495555 PDE12Q6L8Q7 609 aaKnown RBP13.55□□□□□ -0.24
IFT27-211ENST00000495555 CATSPER4Q7RTX7 472 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 CCDC83Q8IWF9 413 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 FAM184AQ8NB25 1140 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 NEK9Q8TD19 979 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 POF1BQ8WVV4 589 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 PSPC1Q8WXF1 523 aaKnown RBP13.55□□□□□ -0.24
IFT27-211ENST00000495555 DYDC2Q96IM9 177 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 NLRP4Q96MN2 994 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 CCDC43Q96MW1 224 aaKnown RBP13.55□□□□□ -0.24
IFT27-211ENST00000495555 NECAB3Q96P71 396 aaPredicted RBP13.55□□□□□ -0.24
IFT27-211ENST00000495555 IGFLR1Q9H665 355 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
IFT27-211ENST00000495555 RGL1Q9NZL6 768 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 COL4A3BPQ9Y5P4 624 aa13.55□□□□□ -0.24
IFT27-211ENST00000495555 NCOR1O75376 2440 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 FSD2A1L4K1 749 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 CARNS1A5YM72 827 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 H3BQ06 376 aaPredicted RBP13.54□□□□□ -0.24
IFT27-211ENST00000495555 SLITRK3O94933 977 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 FGFR4P22455 802 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 TXKP42681 527 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 KRT17Q04695 432 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 CTTNQ14247 550 aaKnown RBP13.54□□□□□ -0.24
IFT27-211ENST00000495555 COL19A1Q14993 1142 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 TWF2Q6IBS0 349 aaKnown RBP13.54□□□□□ -0.24
IFT27-211ENST00000495555 LRRC43Q8N309 656 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 COLGALT1Q8NBJ5 622 aa13.54□□□□□ -0.24
IFT27-211ENST00000495555 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.54□□□□□ -0.24
IFT27-211ENST00000495555 PRPF31Q8WWY3 499 aaKnown RBP13.54□□□□□ -0.24
IFT27-211ENST00000495555 EIF2AK1Q9BQI3 630 aaKnown RBP13.54□□□□□ -0.24
IFT27-211ENST00000495555 DHX33Q9H6R0 707 aaKnown RBP13.54□□□□□ -0.24
IFT27-211ENST00000495555 UPF2Q9HAU5 1272 aaKnown RBP13.54□□□□□ -0.24
IFT27-211ENST00000495555 GRXCR2A6NFK2 248 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 CSDE1O75534 798 aaKnown RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 FGF18O76093 207 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 CSPG5O95196 566 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 LYPLA2O95372 231 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 SRGAP2CP0DJJ0 459 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 ATP2B1P20020 1258 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 PPM1AP35813 382 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 RBM25P49756 843 aaKnown RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 RAB27AP51159 221 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 SPIRE1Q08AE8 756 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 NCBP1Q09161 790 aaKnown RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 HYAL1Q12794 435 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 ORC2Q13416 577 aaPredicted RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 MXD4Q14582 209 aaPredicted RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 BMS1Q14692 1282 aaKnown RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 SRGAP1Q7Z6B7 1085 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 KSR1Q8IVT5 923 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 TMEM143Q96AN5 459 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 ZNF558Q96NG5 402 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 CASD1Q96PB1 797 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 HSD17B14Q9BPX1 270 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 TRAIPQ9BWF2 469 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 MRPL9Q9BYD2 267 aaKnown RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 FOXP1Q9H334 677 aaPredicted RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 ANKEF1Q9NU02 776 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 PIN4Q9Y237 131 aaKnown RBP13.53□□□□□ -0.24
IFT27-211ENST00000495555 LZTS1Q9Y250 596 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 KIF3AQ9Y496 699 aa13.53□□□□□ -0.24
IFT27-211ENST00000495555 BRWD1Q9NSI6 2320 aa13.52□□□□□ -0.24
IFT27-211ENST00000495555 XRCC6P12956 609 aaKnown RBP eCLIP13.52□□□□□ -0.25
IFT27-211ENST00000495555 DNAJB1P25685 340 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 MCM7P33993 719 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 PHKA2P46019 1235 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 LAMTOR4Q0VGL1 99 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 CAMK1Q14012 370 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 TFDP1Q14186 410 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 EMC2Q15006 297 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.25
IFT27-211ENST00000495555 CTC1Q2NKJ3 1217 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 KCNT2Q6UVM3 1135 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 GLB1LQ6UWU2 654 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 FAM178BQ8IXR5 827 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
IFT27-211ENST00000495555 FBXO18Q8NFZ0 1043 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 PGBD4Q96DM1 585 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 MTMR9Q96QG7 549 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 MTRQ99707 1265 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 C1QTNF1Q9BXJ1 281 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 CWH43Q9H720 699 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 TLE6Q9H808 572 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 TLR9Q9NR96 1032 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 SPG21Q9NZD8 308 aa13.52□□□□□ -0.25
IFT27-211ENST00000495555 WRAP73Q9P2S5 460 aaPredicted RBP13.52□□□□□ -0.25
IFT27-211ENST00000495555 MYO7AQ13402 2215 aa13.51□□□□□ -0.25
IFT27-211ENST00000495555 ST18O60284 1047 aa13.51□□□□□ -0.25
IFT27-211ENST00000495555 ZNF623O75123 536 aa13.51□□□□□ -0.25
IFT27-211ENST00000495555 DGAT1O75907 488 aa13.51□□□□□ -0.25
IFT27-211ENST00000495555 SSTR3P32745 418 aaPredicted RBP13.51□□□□□ -0.25
IFT27-211ENST00000495555 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
IFT27-211ENST00000495555 NDUFV1P49821 464 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms