RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 SMARCA1P28370 1054 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 PDIA3P30101 505 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 GSTT1P30711 240 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 CTNNA1P35221 906 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 PCK1P35558 622 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 MMP13P45452 471 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 PTDSS1P48651 473 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 CARSP49589 748 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 CDK7P50613 346 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 PDE6CP51160 858 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 RAD23BP54727 409 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 BPIFB4P59827 614 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 RPL26P61254 145 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 OCRLQ01968 901 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 PPARAQ07869 468 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 DHX9Q08211 1270 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 ADCY1Q08828 1119 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 PAK1Q13153 545 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 EIF4A2Q14240 407 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 MAP7Q14244 749 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 RCN2Q14257 317 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 KCNJ12Q14500 433 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 KPNB1Q14974 876 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 TTF1Q15361 905 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 SAFBQ15424 915 aaKnown RBP eCLIP2.95□□□□□ -1.94
MDC1-208ENST00000494654 BCL2A1Q16548 175 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 ZNF827Q17R98 1081 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 MUM1Q2TAK8 710 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 CNPY1Q3B7I2 92 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 KRT71Q3SY84 523 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 FAM153CQ494X1 144 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 CFAP221Q4G0U5 840 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 CRTC2Q53ET0 693 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 HSP90AA4PQ58FG1 418 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 TBCELQ5QJ74 424 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 RNF220Q5VTB9 566 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 TBC1D9BQ66K14 1250 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 TRIM68Q6AZZ1 485 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 GALNT17Q6IS24 598 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 NFRKBQ6P4R8 1299 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 CCDC174Q6PII3 467 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 WDR59Q6PJI9 974 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 OLFML1Q6UWY5 402 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 CEP128Q6ZU80 1094 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 MARK2Q7KZI7 788 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 TMC3Q7Z5M5 1100 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 AACSQ86V21 672 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 MYOCDQ8IZQ8 938 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 NME8Q8N427 588 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.95□□□□□ -1.94
MDC1-208ENST00000494654 RBBP8NLQ8NC74 664 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 PHC3Q8NDX5 983 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 LINS1Q8NG48 757 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 ZCRB1Q8TBF4 217 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 DIS3LQ8TF46 1054 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 DYDC1Q8WWB3 177 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 IFT81Q8WYA0 676 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 ABHD8Q96I13 439 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 ZNF594Q96JF6 807 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 PBKQ96KB5 322 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 NEUROD6Q96NK8 337 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 INPP4AQ96PE3 977 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 GBP5Q96PP8 586 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 TMEM237Q96Q45 408 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 GSDMAQ96QA5 445 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 NR1H4Q96RI1 486 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 TUBGCP5Q96RT8 1024 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 CORO1BQ9BR76 489 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 PYM1Q9BRP8 204 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 SPATA16Q9BXB7 569 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 PPP1R12CQ9BZL4 782 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 STMN4Q9H169 189 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 RXFP1Q9HBX9 757 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 METTL14Q9HCE5 456 aaKnown RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 PRM3Q9NNZ6 103 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 POLMQ9NP87 494 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 JADE2Q9NQC1 790 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 DDX21Q9NR30 783 aaKnown RBP eCLIP2.95□□□□□ -1.94
MDC1-208ENST00000494654 HELLSQ9NRZ9 838 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 EXOC1Q9NV70 894 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 CUEDC1Q9NWM3 386 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 NMRK1Q9NWW6 199 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 QPCTLQ9NXS2 382 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 DLGAP2Q9P1A6 1054 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 SUCLA2Q9P2R7 463 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 STOML1Q9UBI4 398 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 FAM153AQ9UHL3 310 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 RWDD2AQ9UIY3 292 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 FBXO2Q9UK22 296 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 USP20Q9Y2K6 914 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 USP15Q9Y4E8 981 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 CTDP1Q9Y5B0 961 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 HRH3Q9Y5N1 445 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 MAFBQ9Y5Q3 323 aaPredicted RBP2.95□□□□□ -1.94
MDC1-208ENST00000494654 NRXN2Q9P2S2 1712 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 SIP14410 1827 aa2.95□□□□□ -1.94
MDC1-208ENST00000494654 ABCB11O95342 1321 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MAP3K19Q56UN5 1328 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 UMODL1Q5DID0 1318 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DCCP43146 1447 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms