RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ZP2Q05996 745 aa26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 NR5A1Q13285 461 aa26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 EARS2Q5JPH6 523 aaKnown RBP26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 TMEM31Q5JXX7 168 aa26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 RBM23Q86U06 439 aaKnown RBP26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 SLFN12Q8IYM2 578 aa26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 CHST12Q9NRB3 414 aa26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 PPME1Q9Y570 386 aa26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 PCDHGC5Q9Y5F6 944 aa26.53■■□□□ 1.84
RHBDD3-206ENST00000493894 FAM205CA6NFA0 338 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 PI4K2BG5E9Z4 385 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 BAG4O95429 457 aaKnown RBP26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 PPM1AP35813 382 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 NEK4P51957 841 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 EPHA7Q15375 998 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 SMAD2Q15796 467 aaKnown RBP26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 NCAPH2Q6IBW4 605 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 ADHFE1Q8IWW8 467 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 NLRP4Q96MN2 994 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 LXNQ9BS40 222 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 LZTS1Q9Y250 596 aa26.52■■□□□ 1.84
RHBDD3-206ENST00000493894 FSD2A1L4K1 749 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 EOMESO95936 686 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 POLGP54098 1239 aaPredicted RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 NPEPPSP55786 919 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 CLLU1OSQ5K130 101 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 PDE12Q6L8Q7 609 aaKnown RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 LRRC55Q6ZSA7 311 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 ZNF598Q86UK7 904 aaKnown RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 EXOC8Q8IYI6 725 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 NSUN7Q8NE18 718 aaKnown RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 MRPS27Q92552 414 aaKnown RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 TNFRSF25Q93038 417 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 CEP170P1Q96L14 293 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 ZNF558Q96NG5 402 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 POP1Q99575 1024 aaKnown RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 MRPL9Q9BYD2 267 aaKnown RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 TLE6Q9H808 572 aa26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 WRAP73Q9P2S5 460 aaPredicted RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 PIN4Q9Y237 131 aaKnown RBP26.51■■□□□ 1.83
RHBDD3-206ENST00000493894 ATF7P17544 494 aaPredicted RBP26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 RFC5P40937 340 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 PLCB3Q01970 1234 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 TRIM29Q14134 588 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 TWF2Q6IBS0 349 aaKnown RBP26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 KCNT2Q6UVM3 1135 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 C4orf19Q8IY42 314 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 HELQQ8TDG4 1101 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 MSLNLQ96KJ4 702 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 LRFN3Q9BTN0 628 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 RAPGEFL1Q9UHV5 662 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 PUF60Q9UHX1 559 aaKnown RBP26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 COL4A3BPQ9Y5P4 624 aa26.5■■□□□ 1.83
RHBDD3-206ENST00000493894 YWHABP31946 246 aaKnown RBP26.49■■□□□ 1.83
RHBDD3-206ENST00000493894 ERVFC1P60507 584 aa26.49■■□□□ 1.83
RHBDD3-206ENST00000493894 SPIRE1Q08AE8 756 aa26.49■■□□□ 1.83
RHBDD3-206ENST00000493894 KSR1Q8IVT5 923 aa26.49■■□□□ 1.83
RHBDD3-206ENST00000493894 RSPH1Q8WYR4 309 aa26.49■■□□□ 1.83
RHBDD3-206ENST00000493894 CDCA3Q99618 268 aaPredicted RBP26.49■■□□□ 1.83
RHBDD3-206ENST00000493894 TRAIPQ9BWF2 469 aa26.49■■□□□ 1.83
RHBDD3-206ENST00000493894 CLEC1BQ9P126 229 aa26.49■■□□□ 1.83
RHBDD3-206ENST00000493894 FSCN2O14926 492 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 JAK2O60674 1132 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 GPR37L1O60883 481 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 GLP2RO95838 553 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 SKIP12755 728 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 ALADP13716 330 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 PHKA2P46019 1235 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 OTUD6AQ7L8S5 288 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 CATSPER4Q7RTX7 472 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 PSPC1Q8WXF1 523 aaKnown RBP26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 DYDC2Q96IM9 177 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 DHX33Q9H6R0 707 aaKnown RBP26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 ZSWIM4Q9H7M6 989 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 ENTPD7Q9NQZ7 604 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 RGL1Q9NZL6 768 aa26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 BARX2Q9UMQ3 279 aaPredicted RBP26.48■■□□□ 1.83
RHBDD3-206ENST00000493894 FAM86C2PA6NEL3 165 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 C19orf67A6NJJ6 358 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 GAS2O43903 313 aaKnown RBP26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 EYA4O95677 639 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 PBX3P40426 434 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 RAB27AP51159 221 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 FOSBP53539 338 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 CYP4A11Q02928 519 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 KRT17Q04695 432 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 DUSP6Q16828 381 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 PLPP4Q5VZY2 271 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 DIS3L2Q8IYB7 885 aaKnown RBP26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 ZNF579Q8NAF0 562 aaKnown RBP26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 SMRP1Q8NCR6 262 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 TCF25Q9BQ70 676 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 C11orf16Q9NQ32 467 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 SPG21Q9NZD8 308 aa26.47■■□□□ 1.83
RHBDD3-206ENST00000493894 ARID2Q68CP9 1835 aa26.46■■□□□ 1.83
RHBDD3-206ENST00000493894 PER2O15055 1255 aa26.46■■□□□ 1.83
RHBDD3-206ENST00000493894 COASYQ13057 564 aa26.46■■□□□ 1.83
RHBDD3-206ENST00000493894 CTTNQ14247 550 aaKnown RBP26.46■■□□□ 1.83
RHBDD3-206ENST00000493894 EMC2Q15006 297 aa26.46■■□□□ 1.83
RHBDD3-206ENST00000493894 CALCRLQ16602 461 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms