RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 BTBD6Q96KE9 485 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 CLDN3O15551 220 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 FRA10AC1Q70Z53 315 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 ING2Q9H160 280 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 TMCC1O94876 653 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 ITPRIPL1Q6GPH6 555 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 LCA5Q86VQ0 697 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 GCNAQ96QF7 691 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 MRFAP1Q9Y605 127 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 THEM5Q8N1Q8 247 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 PDLIM2Q96JY6 352 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 C2orf40Q9H1Z8 148 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 SAMD9Q5K651 1589 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 RHOT1Q8IXI2 618 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 NCLNQ969V3 563 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 MORC2Q9Y6X9 1032 aaPredicted RBP21.43■■□□□ 1.02
RNF40-203ENST00000493683 GOLGA8MH3BSY2 632 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 E2F6O75461 281 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 BRAFP15056 766 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 HDAC4P56524 1084 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 PADI6Q6TGC4 694 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 STAP1Q9ULZ2 295 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 UBE4BO95155 1302 aa21.43■■□□□ 1.02
RNF40-203ENST00000493683 SLC4A1P02730 911 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 ZFXP17010 805 aaPredicted RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 GFPT1Q06210 699 aaPredicted RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 MAPK6Q16659 721 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 ZNF699Q32M78 642 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 TBC1D10BQ4KMP7 808 aaPredicted RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 PDXDC1Q6P996 788 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 KIRREL3Q8IZU9 778 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 MCAMP43121 646 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 GRM4Q14833 912 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 TGS1Q96RS0 853 aaKnown RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 MTRQ99707 1265 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 FEM1BQ9UK73 627 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 MAGED2Q9UNF1 606 aaPredicted RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 ABCB11O95342 1321 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 HNRNPCL2B2RXH8 293 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 PHKA2P46019 1235 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 NUP85Q9BW27 656 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 DNAJC17Q9NVM6 304 aaKnown RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 LMCD1Q9NZU5 365 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 SYCE1LA8MT33 242 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 ZBBXA8MT70 800 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 H3BRJ5 948 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 NPR1P16066 1061 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 EIF2AK2P19525 551 aaKnown RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 E2F4Q16254 413 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 CDO1Q16878 200 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 TRIM59Q8IWR1 403 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 RFFLQ8WZ73 363 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 FSD1LQ9BXM9 530 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 VIPAS39Q9H9C1 493 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 ERBB3P21860 1342 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 PLEKHG2Q9H7P9 1386 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 OSTNP61366 133 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 MTMR1Q13613 665 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 KCNB1Q14721 858 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 PPP6R3Q5H9R7 873 aaPredicted RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 FAM47EQ6ZV65 393 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 GFM2Q969S9 779 aaKnown RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 ZMAT2Q96NC0 199 aaKnown RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 TRPV6Q9H1D0 765 aa21.42■■□□□ 1.02
RNF40-203ENST00000493683 TRIM45Q9H8W5 580 aaPredicted RBP21.42■■□□□ 1.02
RNF40-203ENST00000493683 SDC4P31431 198 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 MB21D2Q8IYB1 491 aaPredicted RBP21.41■■□□□ 1.02
RNF40-203ENST00000493683 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
RNF40-203ENST00000493683 SRGAP2O75044 1071 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 KIAA1755Q5JYT7 1200 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 COG1Q8WTW3 980 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 INTS2Q9H0H0 1204 aaKnown RBP21.41■■□□□ 1.02
RNF40-203ENST00000493683 GOLPH3LQ9H4A5 285 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 PNMA3Q9UL41 463 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 TMEM94Q12767 1356 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 IREB2P48200 963 aaKnown RBP21.41■■□□□ 1.02
RNF40-203ENST00000493683 VAMP7P51809 220 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 STAT4Q14765 748 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 ARID5BQ14865 1188 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 PARP9Q8IXQ6 854 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 ACAP3Q96P50 834 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 EFTUD2Q15029 972 aaKnown RBP eCLIP21.41■■□□□ 1.025e-7■■■■□ 19.7
RNF40-203ENST00000493683 OR9Q1Q8NGQ5 310 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 STAMBPL1Q96FJ0 436 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 TRIM62Q9BVG3 475 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 PPCSQ9HAB8 311 aa21.41■■□□□ 1.02
RNF40-203ENST00000493683 HOXA13P31271 388 aaPredicted RBP21.4■■□□□ 1.02
RNF40-203ENST00000493683 ZNF772Q68DY9 489 aaPredicted RBP21.4■■□□□ 1.02
RNF40-203ENST00000493683 RWDD4Q6NW29 188 aaKnown RBP21.4■■□□□ 1.02
RNF40-203ENST00000493683 LRRC31Q6UY01 552 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 QTRT2Q9H974 415 aaKnown RBP21.4■■□□□ 1.02
RNF40-203ENST00000493683 MYO3BQ8WXR4 1341 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 CYP2D7A0A087X1C5 515 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 TRIM49BA6NDI0 452 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 MAN1A2O60476 641 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 DBNDD1Q9H9R9 158 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 SLC26A4O43511 780 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 SLC1A1P43005 524 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 KYAT1Q16773 422 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 ARHGAP26Q9UNA1 814 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms