RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 ARMC5Q96C12 935 aa13.95□□□□□ -0.18
VPS52-220ENST00000493674 TYW1Q9NV66 732 aaKnown RBP13.95□□□□□ -0.18
VPS52-220ENST00000493674 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
VPS52-220ENST00000493674 PTCH2Q9Y6C5 1203 aa13.95□□□□□ -0.18
VPS52-220ENST00000493674 K7ENM7 598 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 MAGEB2O15479 319 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 TGFB1I1O43294 461 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 INHAP05111 366 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 NAMPTP43490 491 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 PSEN2P49810 448 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 ADAM17P78536 824 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 KCNA1Q09470 495 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 DRP2Q13474 957 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 MFSD10Q14728 455 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 PPP2R5AQ15172 486 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 GRIK4Q16099 956 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 ZC2HC1CQ53FD0 456 aaPredicted RBP13.94□□□□□ -0.18
VPS52-220ENST00000493674 MARCH8Q5T0T0 291 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 HAUS6Q7Z4H7 955 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 TMEM143Q96AN5 459 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 DDX20Q9UHI6 824 aaKnown RBP13.94□□□□□ -0.18
VPS52-220ENST00000493674 KCNG1Q9UIX4 513 aa13.94□□□□□ -0.18
VPS52-220ENST00000493674 MBLAC1A4D2B0 266 aaPredicted RBP13.93□□□□□ -0.18
VPS52-220ENST00000493674 H0YCG3 227 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 SLC16A4O15374 487 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 C6orf222P0C671 652 aaPredicted RBP13.93□□□□□ -0.18
VPS52-220ENST00000493674 GRK4P32298 578 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 ABCD1P33897 745 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 SMTNP53814 917 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 PPFIA1Q13136 1202 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 CAPSQ13938 189 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 KIAA0753Q2KHM9 967 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 CDCA2Q69YH5 1023 aaPredicted RBP13.93□□□□□ -0.18
VPS52-220ENST00000493674 TAS1R3Q7RTX0 852 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 MAP4K3Q8IVH8 894 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 NELFCDQ8IXH7 590 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 CSGALNACT2Q8N6G5 542 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 LMBR1Q8WVP7 490 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 MRFAP1L1Q96HT8 127 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 IFT74Q96LB3 600 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 PPP1R9BQ96SB3 815 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 TSG101Q99816 390 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 KATNAL1Q9BW62 490 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 XPNPEP3Q9NQH7 507 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 KMT5AQ9NQR1 393 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 LIMA1Q9UHB6 759 aaKnown RBP13.93□□□□□ -0.18
VPS52-220ENST00000493674 TANC1Q9C0D5 1861 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 BRCA2P51587 3418 aa13.93□□□□□ -0.18
VPS52-220ENST00000493674 NRCAMQ92823 1304 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 RRN3P2A6NIE6 340 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 LRRC10BA6NIK2 292 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 MSCO60682 206 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 ADCY5O95622 1261 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 PGK1P00558 417 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 MYL3P08590 195 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 SMIM10L2AP0DMW4 78 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 SMIM10L2BP0DMW5 78 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 EEF1GP26641 437 aaKnown RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 CNGA1P29973 690 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 ZNF75DP51815 510 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 SNRPFP62306 86 aaKnown RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 FANCCQ00597 558 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 SPAG1Q07617 926 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 MXD4Q14582 209 aaPredicted RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 MTHFD1LQ6UB35 978 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 SLC9A9Q8IVB4 645 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 C12orf56Q8IXR9 622 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 PRPF31Q8WWY3 499 aaKnown RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 PSPC1Q8WXF1 523 aaKnown RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 CEP63Q96MT8 703 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 ACCSQ96QU6 501 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 MTG1Q9BT17 334 aaPredicted RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 SRRTQ9BXP5 876 aaKnown RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 CCDC113Q9H0I3 377 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 TMEM206Q9H813 350 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 SPC25Q9HBM1 224 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 DMAC2Q9NW81 257 aa13.92□□□□□ -0.18
VPS52-220ENST00000493674 CGNQ9P2M7 1197 aaKnown RBP13.92□□□□□ -0.18
VPS52-220ENST00000493674 PHLPP2Q6ZVD8 1323 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 A0A1B0GTH6 734 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 KCNJ18B7U540 433 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 ASAP2O43150 1006 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
VPS52-220ENST00000493674 PIGRP01833 764 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 KLRC1P26715 233 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 CDC25BP30305 580 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 DEKP35659 375 aaKnown RBP13.91□□□□□ -0.18
VPS52-220ENST00000493674 FKBP3Q00688 224 aaKnown RBP13.91□□□□□ -0.18
VPS52-220ENST00000493674 POU5F1BQ06416 359 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 LAMTOR4Q0VGL1 99 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 MYBPC2Q14324 1141 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 KCNJ12Q14500 433 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 HIC1Q14526 733 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 TCP11X2Q5H9J9 407 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 GNASQ5JWF2 1037 aa13.91□□□□□ -0.18
VPS52-220ENST00000493674 LHX8Q68G74 356 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms