RNA–Protein interactions for RNA: ENST00000493672.1

SNRNP25-207, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-207ENST00000493672 POLR3CQ9BUI4 534 aaPredicted RBP13.52□□□□□ -0.25
SNRNP25-207ENST00000493672 TRAIPQ9BWF2 469 aa13.52□□□□□ -0.25
SNRNP25-207ENST00000493672 NSUN3Q9H649 340 aaKnown RBP13.52□□□□□ -0.25
SNRNP25-207ENST00000493672 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.52□□□□□ -0.25
SNRNP25-207ENST00000493672 PCDHB12Q9Y5F1 795 aa13.52□□□□□ -0.25
SNRNP25-207ENST00000493672 STK24Q9Y6E0 443 aa13.52□□□□□ -0.25
SNRNP25-207ENST00000493672 LAMA2P24043 3122 aaKnown RBP13.52□□□□□ -0.25
SNRNP25-207ENST00000493672 POTEMA6NI47 508 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 LAD1O00515 517 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 GRM6O15303 877 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 LAG3P18627 525 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 MUTP22033 750 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 FGFR4P22455 802 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 TECP42680 631 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 PHKA2P46019 1235 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 GATMP50440 423 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 RAB27AP51159 221 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 LAMTOR4Q0VGL1 99 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 TFDP1Q14186 410 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 FAM102BQ5T8I3 360 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 HAUS3Q68CZ6 603 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 FERMT3Q86UX7 667 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 KSR1Q8IVT5 923 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 TMEM143Q96AN5 459 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 NACC1Q96RE7 527 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 RAB34Q9BZG1 259 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 IFT122Q9HBG6 1241 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 DBR1Q9UK59 544 aaKnown RBP13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
SNRNP25-207ENST00000493672 KIAA1671Q9BY89 1806 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 H3BQV1 296 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 ZBTB39O15060 712 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 SRGAP2CP0DJJ0 459 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 FGFR1P11362 822 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 RPA1P27694 616 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 GJB2P29033 226 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 RARRES1P49788 294 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 UBE3AQ05086 875 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 POU5F1BQ06416 359 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 RILPL1Q5EBL4 403 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 TWF2Q6IBS0 349 aaKnown RBP13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 ZNF598Q86UK7 904 aaKnown RBP13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 CATSPER3Q86XQ3 398 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 LRRC43Q8N309 656 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 KLHL23Q8NBE8 558 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 PPP2R3CQ969Q6 453 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 MRPL9Q9BYD2 267 aaKnown RBP13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 UBE2ZQ9H832 354 aaPredicted RBP13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 TYW1Q9NV66 732 aaKnown RBP13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 PIN4Q9Y237 131 aaKnown RBP13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 CDH23Q9H251 3354 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 COL6A3P12111 3177 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 CHD9Q3L8U1 2897 aa13.5□□□□□ -0.25
SNRNP25-207ENST00000493672 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 CARNS1A5YM72 827 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 ZNF623O75123 536 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 CSDE1O75534 798 aaKnown RBP13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 CD2BP2O95400 341 aaKnown RBP13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 ITGB1P05556 798 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 TFF2Q03403 129 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 NCBP1Q09161 790 aaKnown RBP13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 PDIA5Q14554 519 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 TCEAL5Q5H9L2 206 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 MCTP1Q6DN14 999 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 COLGALT1Q8NBJ5 622 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 RNF149Q8NC42 400 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 RNF169Q8NCN4 708 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 MCPH1Q8NEM0 835 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 SPPL3Q8TCT6 385 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 ADAMTS19Q8TE59 1207 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 PIGOQ8TEQ8 1089 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 PGBD4Q96DM1 585 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 CASD1Q96PB1 797 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 ALG13Q9NP73 1137 aaKnown RBP13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 BMP2KQ9NSY1 1161 aaPredicted RBP13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 AGPAT5Q9NUQ2 364 aa13.49□□□□□ -0.25
SNRNP25-207ENST00000493672 MED24O75448 989 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 ERLIN2O94905 339 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 BMP1P13497 986 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 AXLP30530 894 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 PPM1AP35813 382 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 ARL2P36404 184 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 PRPHP41219 470 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 PTENP60484 403 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 PTGDRQ13258 359 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 PUS10Q3MIT2 529 aaKnown RBP13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 PDE12Q6L8Q7 609 aaKnown RBP13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 THNSL1Q8IYQ7 743 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 C4orf32Q8N8J7 132 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 POF1BQ8WVV4 589 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 PABPC5Q96DU9 382 aaKnown RBP13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 NFKBIZQ9BYH8 718 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 CWH43Q9H720 699 aa13.48□□□□□ -0.25
SNRNP25-207ENST00000493672 FAM105AQ9NUU6 356 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms