RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 FRMD4BQ9Y2L6 1034 aa16.87■□□□□ 0.29
CACUL1-206ENST00000493518 SOX5P35711 763 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 SCTRP47872 440 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 PMS2P54278 862 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 SEMA3FQ13275 785 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 RINT1Q6NUQ1 792 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 JAMLQ86YT9 394 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 SUGP1Q8IWZ8 645 aaKnown RBP16.86■□□□□ 0.29
CACUL1-206ENST00000493518 GCFC2P16383 781 aaKnown RBP16.86■□□□□ 0.29
CACUL1-206ENST00000493518 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
CACUL1-206ENST00000493518 FMO5P49326 533 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 MTM1Q13496 603 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 EDRF1Q3B7T1 1238 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 LRCH2Q5VUJ6 765 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 CXorf56Q9H5V9 222 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 TMEM59LQ9UK28 342 aa16.86■□□□□ 0.29
CACUL1-206ENST00000493518 ANKRD63C9JTQ0 380 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 GH2P01242 217 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 SP4Q02446 784 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 MREGQ8N565 214 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 TAB3Q8N5C8 712 aaPredicted RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 SYT2Q8N9I0 419 aaPredicted RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 AMNQ9BXJ7 453 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 HOMER2Q9NSB8 354 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 CTNNAL1Q9UBT7 734 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 L3MBTL1Q9Y468 752 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 IRS2Q9Y4H2 1338 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 FERP16591 822 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 NF2P35240 595 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 CLK2P49760 499 aaKnown RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 MYL7Q01449 175 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 SLFN12Q8IYM2 578 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 NEK9Q8TD19 979 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 ATG4AQ8WYN0 398 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 RNF25Q96BH1 459 aaPredicted RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 XPO6Q96QU8 1125 aaKnown RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 INTS2Q9H0H0 1204 aaKnown RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 KCNMB3Q9NPA1 279 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 BZW2Q9Y6E2 419 aaKnown RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 FSBPO95073 299 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 DLATP10515 647 aaKnown RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 SNCBQ16143 134 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 FAM182AQ5T1J6 154 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 PRUNE1Q86TP1 453 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 RBM17Q96I25 401 aaKnown RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 DDX23Q9BUQ8 820 aaKnown RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
CACUL1-206ENST00000493518 TPX2Q9ULW0 747 aaKnown RBP16.85■□□□□ 0.29
CACUL1-206ENST00000493518 PDXKO00764 312 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 RPA1P27694 616 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 ECE1P42892 770 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 ANKRD20A8PQ5CZ79 823 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 PHLDB3Q6NSJ2 640 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 LLGL2Q6P1M3 1020 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 PARP9Q8IXQ6 854 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 CHMP6Q96FZ7 201 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 ODF2LQ9ULJ1 636 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 CCDC188H7C350 402 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 GAS7O60861 476 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 SKAP2O75563 359 aaPredicted RBP16.84■□□□□ 0.29
CACUL1-206ENST00000493518 GABPAQ06546 454 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 MTMR3Q13615 1198 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 RPUSD2Q8IZ73 545 aaKnown RBP16.84■□□□□ 0.29
CACUL1-206ENST00000493518 FUKQ8N0W3 1084 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 RFFLQ8WZ73 363 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 CEP89Q96ST8 783 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 ERP44Q9BS26 406 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 HEMGNQ9BXL5 484 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 ASIC3Q9UHC3 531 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 USP20Q9Y2K6 914 aa16.84■□□□□ 0.29
CACUL1-206ENST00000493518 EMSYQ7Z589 1322 aa16.83■□□□□ 0.29
CACUL1-206ENST00000493518 K7ENM7 598 aa16.83■□□□□ 0.29
CACUL1-206ENST00000493518 NDUFB10O96000 172 aa16.83■□□□□ 0.29
CACUL1-206ENST00000493518 RPL21P46778 160 aaKnown RBP16.83■□□□□ 0.29
CACUL1-206ENST00000493518 CCDC137Q6PK04 289 aaKnown RBP16.83■□□□□ 0.29
CACUL1-206ENST00000493518 TEKT1Q969V4 418 aa16.83■□□□□ 0.29
CACUL1-206ENST00000493518 RAB17Q9H0T7 212 aa16.83■□□□□ 0.29
CACUL1-206ENST00000493518 A6NNZ2 444 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 COMTP21964 271 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 TUBB8Q3ZCM7 444 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 KIAA1755Q5JYT7 1200 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 PPP1R18Q6NYC8 613 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 EP400NLQ6ZTU2 488 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 CD302Q8IX05 232 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 CCDC197Q8NCU1 140 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 ETNPPLQ8TBG4 499 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 TBC1D22AQ8WUA7 517 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 RUBCNQ92622 972 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 TDRD3Q9H7E2 651 aaKnown RBP16.83■□□□□ 0.28
CACUL1-206ENST00000493518 PARVGQ9HBI0 331 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 FAM114A2Q9NRY5 505 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 SUCLA2Q9P2R7 463 aaPredicted RBP16.83■□□□□ 0.28
CACUL1-206ENST00000493518 SCP2P22307 547 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
CACUL1-206ENST00000493518 BIRC3Q13489 604 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 NAA25Q14CX7 972 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 ARHGEF19Q8IW93 802 aa16.83■□□□□ 0.28
CACUL1-206ENST00000493518 ATP8B4Q8TF62 1192 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms