RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TOR1AIP2Q8NFQ8 470 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 SLC35G2Q8TBE7 412 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 SCG3Q8WXD2 468 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CDKL2Q92772 493 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CASP10Q92851 521 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 KIAA1191Q96A73 305 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 DHX58Q96C10 678 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 FAM167AQ96KS9 214 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 RIPOR3Q96MK2 946 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TAAR9Q96RI9 348 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TRIM56Q9BRZ2 755 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ACPTQ9BZG2 426 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 TRIM5Q9C035 493 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PHACTR1Q9C0D0 580 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 VPS11Q9H270 941 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PARVGQ9HBI0 331 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 PDE11AQ9HCR9 933 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 ARFGAP3Q9NP61 516 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 MALT1Q9UDY8 824 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 FAM153AQ9UHL3 310 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 MOSPD1Q9UJG1 213 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 POLIQ9UNA4 740 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
BRCA1-220ENST00000492859 SESN1Q9Y6P5 492 aa4.61□□□□□ -1.67
BRCA1-220ENST00000492859 USP19O94966 1318 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 MAP3K19Q56UN5 1328 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 TRAV6A0A075B6T7 132 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 A0A087WV62 115 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 RGSL1A5PLK6 1076 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 KRT87PA6NCN2 255 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 FAM187AA6NFU0 413 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 F5H0A9 414 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 C6orf229H3BNL8 230 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ENC1O14682 589 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 PLD2O14939 933 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 IRAK2O43187 625 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ITGB1P05556 798 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 HEXBP07686 556 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 TPM1P09493 284 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CKBP12277 381 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ARF4P18085 180 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ALAS2P22557 587 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 KELP23276 732 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CCND1P24385 295 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 YY1P25490 414 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 L1CAMP32004 1257 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CRKP46108 304 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 HAAOP46952 286 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 VPS41P49754 854 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CDR1P51861 262 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 HADHBP55084 474 aaKnown RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ARPC4P59998 168 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 BTKQ06187 659 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 FRG1Q14331 258 aaKnown RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 KRT32Q14532 448 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 LAPTM4AQ15012 233 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF674Q2M3X9 581 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 INAVAQ3KP66 663 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CFAP100Q494V2 611 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 AARDQ4LEZ3 155 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 FNDC3BQ53EP0 1204 aaKnown RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 FAM26DQ5JW98 314 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 INTS3Q68E01 1043 aaKnown RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 PRPF40BQ6NWY9 871 aaKnown RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ELMSAN1Q6PJG2 1045 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 IL27RAQ6UWB1 636 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 LMBR1LQ6UX01 489 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 PPP1R21Q6ZMI0 780 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF600Q6ZNG1 722 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 SH3BP5LQ7L8J4 393 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 BNIPLQ7Z465 357 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 UNC45BQ8IWX7 931 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 PRR18Q8N4B5 295 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 OR2C3Q8N628 320 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 FBXO15Q8NCQ5 510 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 AGBL5Q8NDL9 886 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 C7orf57Q8NEG2 295 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ZMIZ2Q8NF64 920 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 OR52K1Q8NGK4 314 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 TTLL11Q8NHH1 800 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 RFWD2Q8NHY2 731 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CEP76Q8TAP6 659 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 AGR3Q8TD06 166 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 FAXDC2Q96IV6 333 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CABS1Q96KC9 395 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 PPP1R13BQ96KQ4 1090 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC74BQ96LY2 380 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 TTC25Q96NG3 672 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 DACH2Q96NX9 599 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CATSPER2Q96P56 530 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 MTMR9Q96QG7 549 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 FNBP1Q96RU3 617 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 EYA3Q99504 573 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 RIOK1Q9BRS2 568 aaKnown RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 PHF20Q9BVI0 1012 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 APOL5Q9BWW9 433 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ESF1Q9H501 851 aaKnown RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 C8orf33Q9H7E9 229 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 NRDE2Q9H7Z3 1164 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 TM9SF3Q9HD45 589 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms