RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 UGT8Q16880 541 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 ANO1Q5XXA6 986 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 ZNF385CQ66K41 422 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 ZNF765Q7L2R6 523 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 KRT28Q7Z3Y7 464 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 TGFBRAP1Q8WUH2 860 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 DCAF5Q96JK2 942 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 HSPA12BQ96MM6 686 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 AIFM3Q96NN9 605 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 TCF7L1Q9HCS4 588 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 TOPORSQ9NS56 1045 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 H2AFY2Q9P0M6 372 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 PPARGC1AQ9UBK2 798 aaKnown RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 POLR3AO14802 1390 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 ANKRD30AQ9BXX3 1397 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 WDR33Q9C0J8 1336 aaKnown RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 C7orf72A4D263 438 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 GLTPD2A6NH11 291 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 ZBTB7AO95365 584 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 AKAP5P24588 427 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 LRRC32Q14392 662 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 DHX8Q14562 1220 aaKnown RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 GPR158Q5T848 1215 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 FAM180AQ6UWF9 173 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 HIPK4Q8NE63 616 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 PJA1Q8NG27 643 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 ASB11Q8WXH4 323 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 ERCC4Q92889 916 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 RAX2Q96IS3 184 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 ZDHHC5Q9C0B5 715 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 MKNK2Q9HBH9 465 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 MSRAQ9UJ68 235 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 NUDT5Q9UKK9 219 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 CBLCQ9ULV8 474 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 SNX11Q9Y5W9 270 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 COL2A1P02458 1487 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 FAM170BA6NMN3 283 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 CYP26A1O43174 497 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 PHC1P78364 1004 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 KRT85P78386 507 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 KIF23Q02241 960 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 INF2Q27J81 1249 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 UAP1L1Q3KQV9 507 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 RTP2Q5QGT7 225 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 CCDC149Q6ZUS6 474 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 MYLK4Q86YV6 388 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 DCP2Q8IU60 420 aaKnown RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 CCDC103Q8IW40 242 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 FAM181AQ8N9Y4 354 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 TP53INP1Q96A56 240 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 MEGF10Q96KG7 1140 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 ELAC2Q9BQ52 826 aaKnown RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 DUSP15Q9H1R2 295 aaPredicted RBP3.73□□□□□ -1.81
SNX13-209ENST00000492626 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.73□□□□□ -1.81
SNX13-209ENST00000492626 GULP1Q9UBP9 304 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 PNPLA7Q6ZV29 1317 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 IGSF1Q8N6C5 1336 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 HMX2A2RU54 273 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 KCNK3O14649 394 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 ARL4AP40617 200 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 JAM2P57087 298 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 TERF2Q15554 542 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 PDCD2Q16342 344 aaPredicted RBP3.72□□□□□ -1.81
SNX13-209ENST00000492626 CPSF6Q16630 551 aaKnown RBP eCLIP3.72□□□□□ -1.81
SNX13-209ENST00000492626 IFI16Q16666 785 aaKnown RBP3.72□□□□□ -1.81
SNX13-209ENST00000492626 IL31Q6EBC2 164 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 C1orf228Q6PIY5 440 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 SEZ6L2Q6UXD5 910 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 USHBP1Q8N6Y0 703 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 SCLT1Q96NL6 688 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 SARGQ9BW04 601 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 C7orf69Q9H7B7 122 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 INTUQ9ULD6 942 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 GPR45Q9Y5Y3 372 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 STEAP3Q658P3 488 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 HHIPL2Q6UWX4 724 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 SRGAP1Q7Z6B7 1085 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 GRAMD1CQ8IYS0 662 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 HEXIM2Q96MH2 286 aaKnown RBP3.72□□□□□ -1.81
SNX13-209ENST00000492626 ARPC5LQ9BPX5 153 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 VTA1Q9NP79 307 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 RWDD3Q9Y3V2 267 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 A0A1W2PQ45 241 aaPredicted RBP3.72□□□□□ -1.81
SNX13-209ENST00000492626 A0A1W2PQY0 241 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 ANO9A1A5B4 782 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 FAM181BA6NEQ2 426 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 NRDCO43847 1150 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 WDHD1O75717 1129 aaPredicted RBP3.72□□□□□ -1.81
SNX13-209ENST00000492626 XPAP23025 273 aaPredicted RBP3.72□□□□□ -1.81
SNX13-209ENST00000492626 BCAR1P56945 870 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 IFIT5Q13325 482 aaKnown RBP3.72□□□□□ -1.81
SNX13-209ENST00000492626 IKZF1Q13422 519 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 ADGRE1Q14246 886 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 RALBP1Q15311 655 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 C10orf62Q5T681 223 aaPredicted RBP3.72□□□□□ -1.81
SNX13-209ENST00000492626 BTBD8Q5XKL5 378 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 RNF43Q68DV7 783 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 OTOP1Q7RTM1 612 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 ZNF354CQ86Y25 554 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 PIP4K2CQ8TBX8 421 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms