RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 ABCB4P21439 1286 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 TRAF1Q13077 416 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 CEP55Q53EZ4 464 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 CCDC174Q6PII3 467 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 STXBP4Q6ZWJ1 553 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 PALB2Q86YC2 1186 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 BANK1Q8NDB2 785 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 ARHGEF26Q96DR7 871 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 TAS2R14Q9NYV8 317 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 MYO1FO00160 1098 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 VIL1P09327 827 aaKnown RBP17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 ARP10275 920 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 CTNNA1P35221 906 aaKnown RBP17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 MYL7Q01449 175 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 PLS1Q14651 629 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 B3GNT9Q6UX72 402 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 B4GALNT4Q76KP1 1039 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 LMO3Q8TAP4 145 aa17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 CTNNBL1Q8WYA6 563 aaPredicted RBP17.5■□□□□ 0.39
SEMA4D-220ENST00000492386 ATXN2Q99700 1313 aaKnown RBP17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 MAPK7Q13164 816 aa17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 KIF22Q14807 665 aa17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 NAA35Q5VZE5 725 aa17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 PHLDB3Q6NSJ2 640 aa17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 TMC3Q7Z5M5 1100 aa17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 SLC9A9Q8IVB4 645 aa17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 ZNF577Q9BSK1 485 aa17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 TMX2Q9Y320 296 aa17.49■□□□□ 0.39
SEMA4D-220ENST00000492386 GUCY2CP25092 1073 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 LIG3P49916 1009 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 BFSP1Q12934 665 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 MTMR3Q13615 1198 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 DAW1Q8N136 415 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 PAGR1Q9BTK6 254 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 WDR11Q9BZH6 1224 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 THAP2Q9H0W7 228 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 RANBP17Q9H2T7 1088 aaKnown RBP17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 ARHGEF10LQ9HCE6 1279 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 COG5Q9UP83 839 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 SRRM3A6NNA2 597 aaPredicted RBP17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 CCDC172P0C7W6 258 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 HPDP32754 393 aaPredicted RBP17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 SEC24CP53992 1094 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 ARHGAP44Q17R89 818 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 CC2D2BQ6DHV5 1058 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 FMNL3Q8IVF7 1028 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 MICALL1Q8N3F8 863 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 LXNQ9BS40 222 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 CENPHQ9H3R5 247 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 FAM114A2Q9NRY5 505 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 DIS3Q9Y2L1 958 aaKnown RBP17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 DAAM1Q9Y4D1 1078 aa17.48■□□□□ 0.39
SEMA4D-220ENST00000492386 FOXN3O00409 490 aaPredicted RBP17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 EXOC3O60645 756 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 HIP1RO75146 1068 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 TNFAIP3P21580 790 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 PTENP60484 403 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 BIRC3Q13489 604 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 MYCBPAPQ8TBZ2 947 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 ATP8B4Q8TF62 1192 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 ZNF473Q8WTR7 871 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 UBLCP1Q8WVY7 318 aaPredicted RBP17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 AKT1S1Q96B36 256 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 HOOK2Q96ED9 719 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 TRIM51Q9BSJ1 452 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 CARD9Q9H257 536 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 HERC5Q9UII4 1024 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 UTP11Q9Y3A2 253 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 FAM170AA1A519 330 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 ANKRD62A6NC57 917 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 AOC3Q16853 763 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 RUFY4Q6ZNE9 571 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 NLRP14Q86W24 1093 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 ARFGAP2Q8N6H7 521 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 CCT8L2Q96SF2 557 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 DPH5Q9H2P9 285 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 SLC12A6Q9UHW9 1150 aa17.47■□□□□ 0.39
SEMA4D-220ENST00000492386 VGLL3A8MV65 326 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 LRRN2O75325 713 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 ERLIN2O94905 339 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 RFX1P22670 979 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 DLG4P78352 724 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 SPATS2Q86XZ4 545 aaKnown RBP17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 SYCP3Q8IZU3 236 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 RDH13Q8NBN7 331 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 AGPAT1Q99943 283 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 TEKT3Q9BXF9 490 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 TXLNGYQ9BZA5 131 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 ERVK-5Q9HDB9 667 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 ARHGEF35A5YM69 484 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 IPO5O00410 1097 aaKnown RBP17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 INPP5BP32019 993 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 DHX9Q08211 1270 aaKnown RBP17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 MYBPC2Q14324 1141 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 AGBL2Q5U5Z8 902 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms