RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 DBF4BQ8NFT6 615 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 HSD17B14Q9BPX1 270 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 LXNQ9BS40 222 aa10.43□□□□□ -0.74
BRCA1-219ENST00000491747 A0A1B0GVL5 298 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 ZBBXA8MT70 800 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 CCP110O43303 1012 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 PARNO95453 639 aaKnown RBP10.42□□□□□ -0.74
BRCA1-219ENST00000491747 PBX2P40425 430 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 CLCN3P51790 818 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 NPEPPSP55786 919 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 FAM193AP78312 1265 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-219ENST00000491747 DRP2Q13474 957 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 LPIN1Q14693 890 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 EFCAB12Q6NXP0 572 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 CNKSR3Q6P9H4 555 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 FBXO38Q6PIJ6 1188 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 TMCO2Q7Z6W1 182 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-219ENST00000491747 LINC00301Q8NCQ3 95 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 PPP1R16BQ96T49 567 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 L2HGDHQ9H9P8 463 aa10.42□□□□□ -0.74
BRCA1-219ENST00000491747 VTNP04004 478 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 SLFN14P0C7P3 912 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 SPATA31C1P0DKV0 1188 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 GHRP10912 638 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 NDUFA8P51970 172 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 TERF2Q15554 542 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 DPCR1Q3MIW9 517 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 FBXO47Q5MNV8 452 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 E4F1Q66K89 784 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 BRAPQ7Z569 592 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 RSPH3Q86UC2 560 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 TPH2Q8IWU9 490 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 C4orf19Q8IY42 314 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 METTL13Q8N6R0 699 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 XPO4Q9C0E2 1151 aaKnown RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 AGO3Q9H9G7 860 aaKnown RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 CEP131Q9UPN4 1083 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 V9GYY5 206 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 MED24O75448 989 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 RABGGTBP53611 331 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 DEFB103AP81534 67 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 SMAD3P84022 425 aaKnown RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 RILPL1Q5EBL4 403 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.41□□□□□ -0.742e-8■■■■■ 27.8
BRCA1-219ENST00000491747 Q7L0L9 218 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 TMC6Q7Z403 805 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 CREBRFQ8IUR6 639 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 NME8Q8N427 588 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 TMEM40Q8WWA1 233 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 ERCC4Q92889 916 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 PPP1R13BQ96KQ4 1090 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 CELF4Q9BZC1 486 aaKnown RBP10.41□□□□□ -0.74
BRCA1-219ENST00000491747 SUGCTQ9HAC7 445 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 IFNKQ9P0W0 207 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 TRPV2Q9Y5S1 764 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 SLC4A7Q9Y6M7 1214 aa10.41□□□□□ -0.74
BRCA1-219ENST00000491747 IGKV6-21A0A0C4DH24 114 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 SPTLC2O15270 562 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 MAGEB2O15479 319 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 GPR32O75388 356 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 ACTN1P12814 892 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 MYOGP15173 224 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 YWHABP31946 246 aaKnown RBP10.4□□□□□ -0.74
BRCA1-219ENST00000491747 WDR5P61964 334 aaKnown RBP10.4□□□□□ -0.74
BRCA1-219ENST00000491747 ECM1Q16610 540 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 IER5Q5VY09 327 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 CATSPER3Q86XQ3 398 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 ZNF668Q96K58 619 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-219ENST00000491747 PBX4Q9BYU1 374 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 ZSWIM4Q9H7M6 989 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 CYP26B1Q9NR63 512 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 FAM53CQ9NYF3 392 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 KDM3AQ9Y4C1 1321 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 CCDC66A2RUB6 948 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 MAFO75444 373 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-219ENST00000491747 BAIAP3O94812 1187 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 FXR2P51116 673 aaKnown RBP eCLIP10.4□□□□□ -0.74
BRCA1-219ENST00000491747 NLRP12P59046 1061 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 TBC1D8BQ0IIM8 1120 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 BMS1Q14692 1282 aaKnown RBP10.4□□□□□ -0.74
BRCA1-219ENST00000491747 KIZQ2M2Z5 673 aa10.4□□□□□ -0.74
BRCA1-219ENST00000491747 IFIH1Q9BYX4 1025 aaKnown RBP10.4□□□□□ -0.74
BRCA1-219ENST00000491747 YBX2Q9Y2T7 364 aaKnown RBP10.4□□□□□ -0.74
BRCA1-219ENST00000491747 ABHD14A-ACY1A0A1B0GW23 586 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 PP2D1A8MPX8 630 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 IKBKBO14920 756 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 ZNF202O95125 648 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 LYPLA2O95372 231 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 ATP2A2P16615 1042 aaKnown RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 CDC25AP30304 524 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 CD52P31358 61 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 ATP2C1P98194 919 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 IKBKEQ14164 716 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 TMEM266Q2M3C6 531 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 ARMCX5Q6P1M9 558 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms